Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1072 ATGGCCTCCACTATCACCGCCGCCTCAGCCGCCACACCCGGAGATGAACCCGACTATGACAGTAGCTGCTCCTCCATAACCACGGTGCCAGACTCCACCAGGAGTTGGATGAGCAACCTCAGCTTCGGTAGCCACCGCCGCAGCAGCACCAGCTCCGTTTCTGTTTGTTCCTCCGCCGTCACCTCCTCTCACAGTACTAAGCCCCACAAAGCAAACCACGCTGCATGGGAGGCCATGCGGCGGCTCTACGGCGACAAGGGCCAAGTCGGGCTCGACCACTTCTGCCTCCTGCGACGGCTAGGCAGCGGCGACATCGGGAACGTCTACCTCTGCCAGATAAGGAACCCCGTGCAGGAGGTGGGGTTGCCGCCTTGCTTCTACGCCATGAAAGTGGTTGACAGAGAAGCACTTGCGATAAGGAACAAGTTGCAGAGAGCAGAGATGGAGAAGGAGATTCTGGGTATTATTGATCACCCTTTTCTGCCTACTTTATACGCTGAGTTTGATGCTTCCCACTATTCCTGCTTGGTCATGGAGTTCTGCCCCGGTGGAGACTTGTACGCTGCTCGGCAACGCCAGCCAGGAAGACGCTTCAGCATTTCATCTGCCAAGTTTTATGCAGCTGAGACACTTCTGGCCCTAGAGTATCTCCACATGATGGGAATAGTGTACAGAGATTTGAAGCCAGAGAACGTGTTAGTAAGAGAAGATGGTCACATTATGCTTTCAGATTTTGATCTTTCTCTCAAATGCGACGTCGTTCCTAAGCTCCTAAGAAGCAAAACCAGTTTCAAGACCTCAAAGAGCTCAACATCTGCCTGTGCTATTCCCATGCAGCCTGTTCTATCTTGTTTCTCGGCGTCAAGCAAGAAAAAGAAAGCAAATATGACAACAATTATAAGTGAAAATGAAGTGGAATTCCAAGAACTTGATCCAGACAATGGAAAAAGGATATGGACAACTCATGATACTAATGCTCCTTTGGCTCAGATGCTATTGACAAAACCCACAAAAGTAACATGGAAACTTGTACGGTGTCCAACTCTTCAGCCTTGCCATTGGGCAATGGCCACCTACTTCACCGGAAATCCACCATTTCCTGCGGCGAACTCAAAACCATCAAACATGTCCATTGCACCTATCTGCACGGCAGCAGGGGGTAGCTGGGCTTACCTAAATCCACGCATCTCTTTCATGCCTATTCTCTGGGTTATTGGGATGAGCAGTGAGGCAGTGACCACCACCCATGGTTTTAAAGTCACTTTTGGACTAAACCACTGGCTTCTCTCTCTAGTCGCCACTGCCTCAAAAGAAAAACAACTTCTACTTATTCTTCATCCAGAACTACTCAGATTATTTCAGAGTTCACCAAAACTTCTTCCATCAGTAATTATCTTTTGTTCAATTGAATCTCTGGGGATGGCCAAGGGAAATGTTGCTGCTAATTCTCCTCTTGAGAGGACTAGCTTGGCTTCACTTGACCAAAAGTTGGCCTTGGCCAAGCGCTGTTCTCATGAGGGTGTGATAGCAGGAGCTAAGGCAGCTGTTGCAGCCACCATTGCCACTGCTATCCCAACTTTCGCTAGTGTAAGGATGCTGCCTTGGGCAAGAGCCAATCTGAATCACACAGCTCAAGCTCTCATAATTTCCACAGTGGCAGGAGCTGCATATTTCATAGTGGCTGATAAGACAGTTTTGGCAACTGCAAGAAAGAACTCCTTCAGGCAACCCTCCAATACCGAAGCATAA 1749 0.4906 MASTITAASAATPGDEPDYDSSCSSITTVPDSTRSWMSNLSFGSHRRSSTSSVSVCSSAVTSSHSTKPHKANHAAWEAMRRLYGDKGQVGLDHFCLLRRLGSGDIGNVYLCQIRNPVQEVGLPPCFYAMKVVDREALAIRNKLQRAEMEKEILGIIDHPFLPTLYAEFDASHYSCLVMEFCPGGDLYAARQRQPGRRFSISSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTSFKTSKSSTSACAIPMQPVLSCFSASSKKKKANMTTIISENEVEFQELDPDNGKRIWTTHDTNAPLAQMLLTKPTKVTWKLVRCPTLQPCHWAMATYFTGNPPFPAANSKPSNMSIAPICTAAGGSWAYLNPRISFMPILWVIGMSSEAVTTTHGFKVTFGLNHWLLSLVATASKEKQLLLILHPELLRLFQSSPKLLPSVIIFCSIESLGMAKGNVAANSPLERTSLASLDQKLALAKRCSHEGVIAGAKAAVAATIATAIPTFASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFRQPSNTEA 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1072 582 Gene3D Phosphorylase Kinase; domain 1 91 184 - -
Glsi02g1072 582 Pfam Early nodulin 93 ENOD93 protein 496 573 IPR005050 -
Glsi02g1072 582 PANTHER FLIPPASE KINASE 1-RELATED 43 298 - -
Glsi02g1072 582 SUPERFAMILY Protein kinase-like (PK-like) 69 252 IPR011009 -
Glsi02g1072 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Glsi02g1072 582 ProSiteProfiles Protein kinase domain profile. 94 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1072 582 Gene3D Transferase(Phosphotransferase) domain 1 185 252 - -
Glsi02g1072 582 Pfam Protein kinase domain 97 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1072 582 MobiDBLite consensus disorder prediction 1 24 - -
Glsi02g1072 582 FunFam protein kinase PINOID 181 249 - -
Glsi02g1072 582 Coils Coil 129 149 - -
Glsi02g1072 582 FunFam protein kinase PINOID 2 92 180 - -
Glsi02g1072 582 SMART serkin_6 94 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1072 Glsi-ChrGlsi02 7179899 7188848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1072 15 303 AGC Kinase Gene Family AT2G26700 59.283 4.28e-109 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Glsi02g1072 Pkinase 2.4e-29 CL0016