Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1063 ATGAAATGGGTCCCCGCGTTTAAATTAAATATTAAAATTCAACTAGCACATTCTTTTCTGCAGTCTCAGATTAAGCTTAACTACTCAACTCAACCCTTGTCTTCTCACAAGGTGGTGGGTGGAAGTATAGAGAGGTCCTTCTGCTTCCATCTATACTTGAAAACCCAGAAGAAAAAAAATGAAACTTTGATGGAGGACAGAAGAGTGAACACAATCGCTGTCATATCAGTGATTGCCCTGATCATCCTCATCGTTATAGTTCGTGTCTGTTTGAAGCTATCAAGGGCTTTCTTCCTCATCTGCGGTGCTGATATTGCCGTGATTCTTGCTGTCTTCGCTTGTGTGCTTATCAGACTGCGTTACAATCGCAGGAGGAGGATTCTGGAGACCCAGTTGAAATCAGAAGGCAGAGAGCTTCGGATAGAGTACAGTTTCTTAAGAAAAGTTGCTGGGGTTCCCACCAAGTTTCGATTCAAGGAGCTAGAGGAAGCCACGGATGGGTTTCGATCATTTCTAGGCCAAGGAGCCTCTGCTTCAGTCTTCAAAGGGATTCTCAACGATGGCACCTCAGTCGCTGTGAAACGAATCCATGGAGAGGAACGAGGAGAGAAAGAGTTCAAATCAGAAGTTGCAGCCATTGCTAGTGTTCAGCATGTGAATCTAGTGAGGCTAATTGGCTATTGCAATGCTCCTACCGCTCCTAGGTACCTTGTTTACGAGTATATCTCAAATGGGTCTTTGGATTGTTGGATTTTCCCCCCAACAAGAAGCCAGGGACGTCGTAGGGGGTGCTTATCGTGGAACTTAAGGTACAAAGTAGCCATTGATGTAGCCAAGGCACTTTCTTACCTTCACCATGATTGCAGATCTAGAATCTTACACCTAGACGTGAAGCCAGAGAACATACTCTTGGATGAAAATTGTCGAGCTCTGGTTGCAGATTTTGGCCTCTCAAAGCTCATGGGCAGGGATGAAAGCCAAGTCATGACTACAGTAAGAGGAACAAGAGGATATTTAGCCCCAGAATGGCTGTTGGAGCATGGGGTTTCTGAGAAATCTGACATTTACAGCTACGGAATGGTCCTCCTGGAGATGATAGGAGGGAGAAGGAATGTGTGTTTGGTGGAAGATCCTAGAGACAAGTCCAAGAAAAAGTGGGAGTACTTTCCAAAGATTGTGAACGAGAAAGTGAGACAAGGGAAGTTCATGGAAATTGTGGATAGTAGGCTAGTAGAAAGTGGGGGTTTGGAGGAGAGGGAGGTAAGAAGACTGGTTTATGTGGCTTTATGGTGCATCCAAGAGAGGCCCAGGCGGAGGCCTAGCATGGCTCAGGTGGGTGAGATGCTAGAAGGGCGTGTGAGGGTGGATGAGCCGCCTGATACCAGAATGATTCTGGTTGATTTACTACCTGTGGAGGGAGATCAGGCACAAGAAGATGGTAATATTATGCCAAGGTTGGCTCAGAGCTATGGGGATTTTACATCAACTTGCTCGTTGGCAACCACAGTTCTTTCTGGCAGATAG 1524 0.4593 MKWVPAFKLNIKIQLAHSFLQSQIKLNYSTQPLSSHKVVGGSIERSFCFHLYLKTQKKKNETLMEDRRVNTIAVISVIALIILIVIVRVCLKLSRAFFLICGADIAVILAVFACVLIRLRYNRRRRILETQLKSEGRELRIEYSFLRKVAGVPTKFRFKELEEATDGFRSFLGQGASASVFKGILNDGTSVAVKRIHGEERGEKEFKSEVAAIASVQHVNLVRLIGYCNAPTAPRYLVYEYISNGSLDCWIFPPTRSQGRRRGCLSWNLRYKVAIDVAKALSYLHHDCRSRILHLDVKPENILLDENCRALVADFGLSKLMGRDESQVMTTVRGTRGYLAPEWLLEHGVSEKSDIYSYGMVLLEMIGGRRNVCLVEDPRDKSKKKWEYFPKIVNEKVRQGKFMEIVDSRLVESGGLEEREVRRLVYVALWCIQERPRRRPSMAQVGEMLEGRVRVDEPPDTRMILVDLLPVEGDQAQEDGNIMPRLAQSYGDFTSTCSLATTVLSGR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1063 507 FunFam Putative receptor-like protein kinase 242 457 - -
Glsi02g1063 507 SMART serkin_6 166 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1063 507 SUPERFAMILY Protein kinase-like (PK-like) 149 450 IPR011009 -
Glsi02g1063 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Glsi02g1063 507 PANTHER OS07G0415500 PROTEIN 92 461 - -
Glsi02g1063 507 Gene3D Transferase(Phosphotransferase) domain 1 242 460 - -
Glsi02g1063 507 ProSiteProfiles Protein kinase domain profile. 166 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1063 507 Pfam Protein kinase domain 171 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1063 507 Gene3D Phosphorylase Kinase; domain 1 131 241 - -
Glsi02g1063 507 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Glsi02g1063 507 FunFam Putative receptor-like protein kinase 133 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1063 Glsi-ChrGlsi02 7134680 7136203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1063 64 461 Receptor kinase-like Gene Family AT5G20050 66.584 0.0 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi02g1063 Pkinase 1.1e-44 CL0016