Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1059 ATGGAGGAACTCCTGTCCTTGATTAAGCTTCTTCCTTTCTCTTTTGTGGCTCTACTGTTTGTTTTAAAGCTTGCAGTGTTGCTCTGGTGGAGACCAAGAAAAATTGAAGCCCATTTCTCCAAGCAAGGAATCAGAGGACCCCCTTATCGTTTCTTCATTGGGAATGTCAAGGAGCTTGTGGGCATGATGTTGAAGGCTTCCTCTCAACCTATGCCTTTCTCCCACAACATTCTCCCCAGAGTCCTTTCTTTCTACCATCATTGGAAGAAAATTTACGGTGCAACATTCCTGGTTTGGTTTGGACCCACAGTTCGTCTCACAGTGTCTGATCCAGACCTCATCAGGGAAATCTTCACCTCTAAGTCAGAATCCTATGAGAAAAATGAATCACCCCCACTTGTCAAACAGCTAGAAGGCGATGGGCTGCTTAGCCTCAAAGGAGAAAAATGGGCTCACCACAGAAAAATCATCTCCCCCACTTTTCACATGGAAAATCTCAAACTGTTGATACCGGTAATGGCAACAAGCGTGGTTGACATGTTGGAGAAATGGTCGGCAATGTCGGAGAAGGGTGAGGTGGAAATCGAAGTTCTGGAGTGGTTTCAGAACCTTACAGAAGATGTCATTACAAGGACAGCTTTTGGAAGCAGCTACGAAGATGGAAAAGCCATTTTCCGCCTCCAAGCCCAGCAAATGCTCTTAGCTGCCGATGCCTTCCAAAAAGTTTTCATCCCAGGTTACAGATTCTTTCCCACGAGGAGGAATATAAATTCTTGGAAACTGGACAAGCAGATTAAGAAATCTCTGGTGAAAGTGATCGAGAGGAGGAAAGAGAATTCGGGAGGGGAAGGAAATGGGAGGGTGGCTAAGGATTTGCTGGGGCTTATGATTCAGGCTTCAAAATCCAATTTCTCACATGTCACAGTGGATGACATCGTGCAAGAGTGCAAGAGCTTTTTCTTTGCGGGCAAACACACCACTTCCAACCTCCTTACGTGGACCACCATTCTCCTAGCAATGCACCCACACTGGCAGGTTCAGGCACGTGAGGAGTTGCTCGCCCTCTGCGGATCACGTGACCTCCCCACCAAAGACGACGTTGCTAAGCTCAAGACGCTGAGCATGATTGTGAATGAATCCCTAAGATTGTACCCGCCAACAATCGCAACTATCAGACGAGCCAAAACGGATGTGGAGCTGGGGGGCTACAAGATCCCACGTGGGACTGAGATCTTGGTTCCAATCCTAGCCGTTCATCATGATCAGGCTATATGGGGGAACGATGCGAATGAGTTCAATCCTGACCGTTTCTCCGAAGGAGTGGCACGTGCTGCGAAGCATCCCGTGGCATTTATGCCATTCGGTCTTGGTGTGCGCACATGCATAGGACAAAATCTCGCTGTTCTACAAACCAAACTGGCTCTTGCGATCATATTACAGCGTTTTAGTTTCAGGTTGTCACCAAGTTATCAGCACGCACCAACGGTGCTGATGCTTCTTTACCCTCAGTATGGTGCTCCAATCATCTTTCGACGTCTGTCCAGAACTGATGATGAAGGGTCCTAA 1566 0.4757 MEELLSLIKLLPFSFVALLFVLKLAVLLWWRPRKIEAHFSKQGIRGPPYRFFIGNVKELVGMMLKASSQPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLTVSDPDLIREIFTSKSESYEKNESPPLVKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKLLIPVMATSVVDMLEKWSAMSEKGEVEIEVLEWFQNLTEDVITRTAFGSSYEDGKAIFRLQAQQMLLAADAFQKVFIPGYRFFPTRRNINSWKLDKQIKKSLVKVIERRKENSGGEGNGRVAKDLLGLMIQASKSNFSHVTVDDIVQECKSFFFAGKHTTSNLLTWTTILLAMHPHWQVQAREELLALCGSRDLPTKDDVAKLKTLSMIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTEILVPILAVHHDQAIWGNDANEFNPDRFSEGVARAAKHPVAFMPFGLGVRTCIGQNLAVLQTKLALAIILQRFSFRLSPSYQHAPTVLMLLYPQYGAPIIFRRLSRTDDEGS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1059 521 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 FunFam Cytochrome P450 734A1 29 514 - -
Glsi02g1059 521 CDD CYP734 82 507 - -
Glsi02g1059 521 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 506 - -
Glsi02g1059 521 Pfam Cytochrome P450 82 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 Gene3D Cytochrome P450 29 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 SUPERFAMILY Cytochrome P450 39 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1059 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1059 Glsi-ChrGlsi02 7103992 7106889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1059 9 518 Cytochrome P450 AT2G26710 77.476 0.0 835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g0974 13 27923073 27927112 Glsi02g1059 02 7103992 7106889 CCT
Glsi02g1059 02 7103992 7106889 Glsi02g1059 02 7103992 7106889 ECH