Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1046 ATGGGGTCCTATGATCCCTCCGCCGCTGCCGCTTCCAATGGTAGCTCATCGAGCGCTGGAATGAAGACCGTGGAGATCGACGGTCTCCTTGCCGGGGCCGGATACAAGGTCAGGTCTTCGGAGCTCCATCAAGTCGCTCGACGTCTCGAGCGCCTTGAGAACGTCATGGTCAACTCCGCCGCCGACATTTCTCAACTGGCTTCCGATACCGTACACTACGACCCCTCCGATATCGGGTCCTGGGTTGACACTCTTCTCTCCGAATTCAACCAGACCGTTTCTTTGCCGTCCGATCTCACGGAGCTTCCGGATCTCCCAACTGGTCCACCGGTCGATCAAACGACGCTCAATAATCGCTGGGTGGTGGACTTTAAAATGTCTCACCAAAACCACCATAACTTCGCCCCTCAGCATCAGCAGCTTCAACAATTGACGGTGATAACGTCTATGGAAGAAGACTCTGGGATAAGACTGGTCCACATGCTGATGACTTGTGCAAATTCTCTTCAACGTGGGGAGTTGGCACTCGCCGGTTCGCTCATCGAGGACATGCAGGGTTTATTGGCGCATGTCAACACCAGCTGCGGCATCGGAAAAGTCGCCGGCTACTTCATCAACGCCCTGAGCCGCCGGATCTTCGCACCGCAGCACCCGAGCATTGGCTCCTGCAACGGCTCGCCTTACGTGGACGAGGTTCTGTACCATCACTATTACGAGGCCTGCCCATACCTGAAATTCGCTCACTTCACGGCGAACCAAGCCATCCTGGAGGCTTTCAACGGCCACGATTGCGTCCACGTTATTGACTTCAACCTCATGCACGGCCTGCAATGGCCTGCTCTAATTCAGGCTCTAGCGCTCCGTCCCGGTGGGCCCCCTCTGCTAAGGTTAACTGGCATTGGGCCACCGTCACCGGACGGACGTGACACGCTGAGGGAAATCGGGTTGCGACTCGCCGAGTTAGCTCGTTCGGTCAATGTGCGATTTGCATTTCGTGGGGTTGCAGCTGTCAGGCTGGAAGACGTGCAGCCACGGATGCTTCAGGTAAGCCCAAAAGAAGCCGTGGCAGTGAACTCCATCATGCAGCTTCACCGTCTTCTCGGGTCTGACCCGACGAGGGAATCCGCTATCGAAATGGTTCTATGTTGGATCCGGAGCCTGAACCCAAAAATAATGACGGTGGTGGAGCAAGAAGCAAATCATAACCAAGCCGGGTTCTTGGACCGGTTCACAGAAGCTCTGTATTATTACTCAACCATGTTCGACTCGCTGGAGGCTTGCACGCTGCAGCCAGATAAAGCCTTAGCCGAGATGTACATACAGAAGGAGATATGCAACGTGTTGTGTTGTGAGGGATGGGCTCGGGTGGAGAGGCACGAGCCGCTGGCGAAGTGGAGAGTTCGGCTAGGCAAAGCCGGGTTTAGGCCTCTGCATTTGGGTTCTAACGCTTTCAAGCAAGCCAGCATGCTGTTGACTCTGTTCTCGGCGGAGGGTTACTGCGTGGAAGAGAACGAAGGGTGTTTGACGTTGGGTTGGCATAGCCGGCCTCTCATTGCAGCTTCGGCTTGGCAAGCCTTTCCGGAGTTTGGAGCACTGGCAACCGTTGCTTTATCTCAGTAA 1620 0.5531 MGSYDPSAAAASNGSSSSAGMKTVEIDGLLAGAGYKVRSSELHQVARRLERLENVMVNSAADISQLASDTVHYDPSDIGSWVDTLLSEFNQTVSLPSDLTELPDLPTGPPVDQTTLNNRWVVDFKMSHQNHHNFAPQHQQLQQLTVITSMEEDSGIRLVHMLMTCANSLQRGELALAGSLIEDMQGLLAHVNTSCGIGKVAGYFINALSRRIFAPQHPSIGSCNGSPYVDEVLYHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDTLREIGLRLAELARSVNVRFAFRGVAAVRLEDVQPRMLQVSPKEAVAVNSIMQLHRLLGSDPTRESAIEMVLCWIRSLNPKIMTVVEQEANHNQAGFLDRFTEALYYYSTMFDSLEACTLQPDKALAEMYIQKEICNVLCCEGWARVERHEPLAKWRVRLGKAGFRPLHLGSNAFKQASMLLTLFSAEGYCVEENEGCLTLGWHSRPLIAASAWQAFPEFGALATVALSQ 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1046 539 Gene3D - 25 89 IPR038088 -
Glsi02g1046 539 Pfam GRAS domain family 158 524 IPR005202 -
Glsi02g1046 539 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 140 520 IPR005202 -
Glsi02g1046 539 SMART DELLA_2 27 99 - -
Glsi02g1046 539 Pfam Transcriptional regulator DELLA protein N terminal 27 92 IPR021914 -
Glsi02g1046 539 FunFam DELLA protein GAI 25 89 - -
Glsi02g1046 539 ProSiteProfiles GRAS family profile. 149 524 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1046 Glsi-ChrGlsi02 7019374 7020993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1046 26 524 GRAS Transcription Factor Family AT1G14920 49.023 9.19e-164 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi02g1046 GRAS 2.3e-125 CL0063