Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1045 ATGAAAGACCCAGAGGAGGATCAAGTGAAATCTAGGAAGCCTCTTCTGCAGAAATCAATGGACCGTAGTAGAAGTATGGATAGGAGACAAACCCAATCCAAACCAGACAAGTTACAAGAAAAAGGGCTTGATTCAGACCTGGGTTCCCCAGCTTCTAGCAGAAGTCTCGTGTTCCATCGCAGGCCTGGCTATGGCCACCTTGGGACGAAGTGTCTGATCAAAGCTAATCACTTCTTTGCGGACATATCAGCTTCAGACTTGAGCCATTACAGTGTTGAAATAACCCCTGAAGTTGCTTCTCCCAAATTAAGCAAGGCTATCATAGCCGAGTTGGTGAGGCTTCGCAGGAACACAGACTTAGAAACCAGGCTCCCTGTTTATGATGGAGGAAGAAATCTCTACACTGCTGGCTCGCTTCCTTTTACATACAAAGAGTTCATCATATTATTGAACGAAGATGATGAGGGTACATATAATAACAGGAAAAGAGAATTTAGAGTGACTATCAAGTTTGCAGCATGTGTTAGTATGCACCAATTGCGTGAGCTTCTTAGTGGGAAACATGTGGACACCCCGCAAGAAGCACTTAGCATCATTGAAGTTGTACTAAGGGAGCTTGCAGCCCAAAGTTATGTATCAATTGGAAGGTTCCTCTATTCTCCTGATATTAAAAAACCACATCAGCTGGGTGGTGGCCTAGAATCATGGCGTGGCTTCTATCAGAGTATAAGGCCTACTCAGATGGGATTATCACTTAGCATTGATATGTCATCAATGGCGTTTATTGAACCAATCCCTGTCATTGACTTCGTTGCTCAAATTTTGGGTAAAGATGTGCATTCAAAGCCATTGTCAGATGCAGATCGATTCAAGATCAAGAAGGCCCTAAGAGGTGTGAAAGTTGAAGTTACTCATAGAGGCAATTTTCGAAGGAAGTACAGGATATCAGGACTAACATCACAGCCTACAAGAGAGCTTATTTTCCCACTTGATGAGAAAATGAACATGATATCTGTAGTTGATTATTTTCAAGAGATTTATGGATATGCAATCAAATATTCTCATCTACCCTGCCTGCAAGTAGGAAATCAAAAGAAGGCGAACTATTTACCCATGGAGGCGTGCAAGATAGTAGGGGGCCAGAGATATACAAAAGGGCTCAACGAAAAGCAGATAACTTCCTTGCTGAAGGTTTCATGCCAGAGACCCCGTGAACAAGAGCTAGACATTCTACAGACAATTCAACAAAATAATTATGAGCATAATGCCTATGCAAAGGAGTTTGGTATCAGCATAGACAACAAGCTTGCATCAGTTGAGGCTCGGGTTCTTCCTACTCCTTGGTTGAAATATCACGACACTGGAAGGGAGAAAGAATACTTGCCAACAGTAGGTCAGTGGAATATGATGAATAAGAAAGTTATAAATGGAAGCACTGTAAGATATTGGGCATGTATTAATTTCTCAAAAAGGGTTCAAGAAAGTACAGCTTGTGGGTTTTGCCAGCAGTTGGTTCAAATGTGCCAAATCACAGGCTTGGAATTCAGCCAGGACCCTGTAATCCCTGTATATTCAGCAAGACCAGATCAGGTAAAGAAGGCCTTGAAGTATGTACATTGTACTGCTCTAGACAAACTTGGTGGGAAAGAGCTAGAGTTGCTAATAGCCATTCTTCCTGACAATAATGGCTCTTTATATGGTAATCTCAAAAAAATCTGCGAAACAGATCTGGGGTTGATTTCTCAGTGCTGCCTCACAAAATATGTATTCAAGATTAATAAACAGTACCTGGCAAATGTGGCTCTAAAAATCAATGTCAAGATGGGAGGAAGAAACACAGTACTTTTAGATGCCTTAAGTTGGAGGATTCCATTGGTTAGTGACATTCCAACAATAATATTTGGTGCTGATATAACTCATCCAGAATCTGCAGACGAGTCTCGTCCATCCATTGCTGCTGTTGTAGCTTCTCAGGACTGGCCCGAAGTATCAAAGTATGCAGGATTGGTATGTGCTCAGCCTCATCGTGAAGAACTCATTCGAGATCTGTTTAAATGTTGGAAAGATCCTCAACTTGGTATAGTTTATGGTGGTATGGTCAGAGAGCTCTTACTCTCATTTAAGGAGGCAACAGGACAAAAACCCTTGAGGATAATATTCTACAGGGATGGGGTTAGTGAAGGACAGTTCTATCAGGTTTTGCTATATGAGCTTGATGCCATCCGCAAGGCTTGTGCGTCTTTGGAGCCTACTTATCAACCTCCTGTAACTTTTGTTGTGGTTAGAAAGCGACATCACACTAGACTCTTCTCAAGCAATCACGATGACAGAAACAGCACTGATAAGAGTGGCAATATCTTACCCGGTACTGTGGTGGATTCAAAGATCTGTCATCCTACTGAATTTGACTTCTATTTATGCAGTCATGCAGGGATCAGGGGCACAAGCAGACCAGCTCACTATAATGTTCTATGGGATGAGAACAATTTCACTGCAGATGAGATTCAATCTCTGACTAACAACTTATGCTACACGTATGCAAGATGTACTCGATCTATTTCTGTCGTTCCTCCAGCATACTATGCTCATTTAGCAGCCTACAGAGCTACATTCTACATGGAACCAGATGTGTCCGGGAATGCTAAAGTAGCGCGAGGTGCAAGATCAAAAGACGGGTTTGTTAGGCCACTGCCACCTCTGAAAGAGAAGGTGAAGAATGTAATGTTTTACTGTTGA 2736 0.4214 MKDPEEDQVKSRKPLLQKSMDRSRSMDRRQTQSKPDKLQEKGLDSDLGSPASSRSLVFHRRPGYGHLGTKCLIKANHFFADISASDLSHYSVEITPEVASPKLSKAIIAELVRLRRNTDLETRLPVYDGGRNLYTAGSLPFTYKEFIILLNEDDEGTYNNRKREFRVTIKFAACVSMHQLRELLSGKHVDTPQEALSIIEVVLRELAAQSYVSIGRFLYSPDIKKPHQLGGGLESWRGFYQSIRPTQMGLSLSIDMSSMAFIEPIPVIDFVAQILGKDVHSKPLSDADRFKIKKALRGVKVEVTHRGNFRRKYRISGLTSQPTRELIFPLDEKMNMISVVDYFQEIYGYAIKYSHLPCLQVGNQKKANYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQELDILQTIQQNNYEHNAYAKEFGISIDNKLASVEARVLPTPWLKYHDTGREKEYLPTVGQWNMMNKKVINGSTVRYWACINFSKRVQESTACGFCQQLVQMCQITGLEFSQDPVIPVYSARPDQVKKALKYVHCTALDKLGGKELELLIAILPDNNGSLYGNLKKICETDLGLISQCCLTKYVFKINKQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADITHPESADESRPSIAAVVASQDWPEVSKYAGLVCAQPHREELIRDLFKCWKDPQLGIVYGGMVRELLLSFKEATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPTYQPPVTFVVVRKRHHTRLFSSNHDDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIRGTSRPAHYNVLWDENNFTADEIQSLTNNLCYTYARCTRSISVVPPAYYAHLAAYRATFYMEPDVSGNAKVARGARSKDGFVRPLPPLKEKVKNVMFYC 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1045 911 CDD Piwi_ago-like 424 873 IPR045246 -
Glsi02g1045 911 ProSiteProfiles PAZ domain profile. 265 379 IPR003100 GO:0005515
Glsi02g1045 911 SUPERFAMILY PAZ domain 260 419 IPR036085 GO:0005515
Glsi02g1045 911 FunFam Protein argonaute-2 258 384 - -
Glsi02g1045 911 Pfam Mid domain of argonaute 462 539 IPR032473 -
Glsi02g1045 911 CDD PAZ_argonaute_like 264 378 - -
Glsi02g1045 911 ProSiteProfiles Piwi domain profile. 553 874 IPR003165 GO:0003676
Glsi02g1045 911 Gene3D - 443 616 - -
Glsi02g1045 911 SMART Piwi_a_2 553 874 IPR003165 GO:0003676
Glsi02g1045 911 Pfam Piwi domain 554 872 IPR003165 GO:0003676
Glsi02g1045 911 Pfam N-terminal domain of argonaute 70 203 IPR032474 -
Glsi02g1045 911 FunFam protein argonaute 10-like 622 911 - -
Glsi02g1045 911 Gene3D - 622 911 IPR036397 GO:0003676
Glsi02g1045 911 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 55 873 - -
Glsi02g1045 911 Pfam Argonaute linker 2 domain 409 451 IPR032472 -
Glsi02g1045 911 SMART DUF1785_2 212 264 IPR014811 -
Glsi02g1045 911 MobiDBLite consensus disorder prediction 1 43 - -
Glsi02g1045 911 Gene3D paz domain 259 383 - -
Glsi02g1045 911 MobiDBLite consensus disorder prediction 1 55 - -
Glsi02g1045 911 FunFam Argonaute 10 443 616 - -
Glsi02g1045 911 Pfam Argonaute linker 1 domain 213 262 IPR014811 -
Glsi02g1045 911 SMART PAZ_2_a_3 269 401 IPR003100 GO:0005515
Glsi02g1045 911 Pfam PAZ domain 269 395 IPR003100 GO:0005515
Glsi02g1045 911 SUPERFAMILY Ribonuclease H-like 542 874 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1045 Glsi-ChrGlsi02 7010750 7015804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1045 58 911 Eukaryotic Initiation Factors Gene Family AT5G43810 72.009 0.0 1340