Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1009 ATGTTTGCCGGGAGCAGGATATTTGCTGTAGTTTGTGAACATTGGGAAGGGATAAATCAGTCACTACCAGTGGACTTGGTCCATACGATTCACCAAGTTCACTCACTAGATAGCAGACAATTTGAAAAAGATGATTCCAAAAGTGGGTCTTTTAGATGGCATCGGAATCGTGTTGGTTTTCGGTCACCCAACTCGGTTCCTTGTTATATGAAACCTAGTGATCGATCTATTGATCCCATGGAAGCACGGCGGGTCTCTCGGACGGTGATCGGCCCTAAAGTCAGGCAGGTGGGTTTCTTCGCTCCCACCGCTCCACAGCCATCTCGCTCCCATTCCGACCTGATTGAGTCAGATTCTCTGCAGCTCTTGGACTCTCCGGTGAGCAACTCGCTCTCTCCAGTGATGATACCGCCGCCGCGTCATCTTTCTGAGAGAAGTGCCTCCATGCCAGTTCCTGAGTCGGGGTTTCGCCAGCAGGCTTCCGGAGACCATGTACCGATTGGGAGCTATAATCCCTCCGTGTCGCTGCTCGGAACTTCACCGTTGGCCTCCCCTTCGAGTCGTGTTGGGATTGTCAACGGAGAGTTCTCCGAGGACTCTACTACCGCGGGCTGGATTCATCGCAGCAGTTCGGGGAAGTTAGCTTCGAGTTTCCCGGGAGGAGGTTTCGATGTGTCGGGCGTGAAGCCTCCAGAAAATTCACTGGGGAATAAGTTCACTGTGCGGGTGGATGTGGAAAAACCCGCTGGCGGCTCTGTGGAGCACAAAATTCCGGCAGAAAAGAGGGAAGAGGGTGACAAAGAAGTAAAGCATGATCTGTCATCAAGTTCAAAGCCACAGAAAGCAAAATCTTCGAAGTCTGAGAGACGGGCCTTGCAGGAGGCACAGCGAGCTGCAAAAGCTGCTTCAAAAGCTGAGGGAAGTAAAGTAGTTGCTGAATCTGGCAGAGCTGCCCCTGTTAAAAATTCAAAGCAATCTTCACAAAAGAAAGATGGTCCTCCTGCTCCATCTTCAGTATCAACTGAAAAGAAAACAGGTGATCGTCCTCCAGAGAAAGAAAGGAAGAAAGATGTTCCTCCTCCACGAATGCAATTTGACGACAAAAGCCGAGTGGAAAAGGCTAAAAGACGTGCAGTAGTCAATCAAACTGAGGCTAGAAAGAGAGTTGAATTATTTCGGCATCTGCCTCAATATGAACACGGGACTCAGCTTCCTAATCTTCTGTTAAAGTTTTTCCAACTTGATGCAGTGCATCCTGCTGTGTTCAAGGTTGGATTGTGTTATTTGGCGGGCGATATATCCGGGGGTAATGCTCGTTGTATTGCAATGCTAAGAGCATTTCAGGAAGCCATCAAAGACTACACCACCCCACGTGAAAAGACCCTTGTCAGGGATTTAACTGCAAAAATCAGCAGTTATGTTTCTTTTTTCACTGAATGTAGACCTCTTTCTATTAGCATGGGAAATGCGATTAGGTTTGTAAAAAGTCGAATTGCCAAGTTGCCTTTAACTCATTCTGAATCTGAGGCAAAAACAACTCTCTATTCTGATATTGACCGGTTCATCAATGAAAAAATAATTCTTGCTGATAAGGTGATTGTTAGACACGCTGCTACAAAGGTTCGAGATGGAGATGTTCTTCTTATATATGGATCGTCATGTGTTGTTGAGATGATTCTTTTATATGCCCATGAGCTTGGGAAACAGTTCCGAGTTGTGTTGGTTGACTCACGACCTAATCTTGAAGGCCAGTCCTTACTTCGTAGGTTGGTGGCGAAGGGCCTGAATTGTACATATATTCATATAAATGCTGTTTCCTATATCATGTATGAGGTTACAAAAGTCTTTCTCGGGGCCTCTGCAGTTCTGTCTAATGGAACTGTATATTCAAGGGTTGGGACTGCATGTGTTGCAATGGTGGCTCATGAATTCCGCATTCCTGTCTTGATCTGTTGTGAAGCATATAAGTTTCATGAAAGAGTGCAACTTGATTCAATATGTTCAAATGAACTAGGTGACCCTGAAGCTATTGCCAGGGTTCCTGGAAGAATGGATGTAAGTTATTTGGACAACTGGACCAGTAGAGACAATTTGCAGCTTTTGAACTTGATGTACGATGCTACTCCTTCAGATTATGTATCTGTGATTGTTACAGATTATGGCATGGTGCCTCCTACTAGTGTTCCTGTTATTGTACGTGAGTATCGAAGAGAGAACCTGTTGATATAG 2229 0.4567 MFAGSRIFAVVCEHWEGINQSLPVDLVHTIHQVHSLDSRQFEKDDSKSGSFRWHRNRVGFRSPNSVPCYMKPSDRSIDPMEARRVSRTVIGPKVRQVGFFAPTAPQPSRSHSDLIESDSLQLLDSPVSNSLSPVMIPPPRHLSERSASMPVPESGFRQQASGDHVPIGSYNPSVSLLGTSPLASPSSRVGIVNGEFSEDSTTAGWIHRSSSGKLASSFPGGGFDVSGVKPPENSLGNKFTVRVDVEKPAGGSVEHKIPAEKREEGDKEVKHDLSSSSKPQKAKSSKSERRALQEAQRAAKAASKAEGSKVVAESGRAAPVKNSKQSSQKKDGPPAPSSVSTEKKTGDRPPEKERKKDVPPPRMQFDDKSRVEKAKRRAVVNQTEARKRVELFRHLPQYEHGTQLPNLLLKFFQLDAVHPAVFKVGLCYLAGDISGGNARCIAMLRAFQEAIKDYTTPREKTLVRDLTAKISSYVSFFTECRPLSISMGNAIRFVKSRIAKLPLTHSESEAKTTLYSDIDRFINEKIILADKVIVRHAATKVRDGDVLLIYGSSCVVEMILLYAHELGKQFRVVLVDSRPNLEGQSLLRRLVAKGLNCTYIHINAVSYIMYEVTKVFLGASAVLSNGTVYSRVGTACVAMVAHEFRIPVLICCEAYKFHERVQLDSICSNELGDPEAIARVPGRMDVSYLDNWTSRDNLQLLNLMYDATPSDYVSVIVTDYGMVPPTSVPVIVREYRRENLLI 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1009 742 MobiDBLite consensus disorder prediction 248 295 - -
Glsi02g1009 742 Pfam Initiation factor 2 subunit family 433 725 IPR000649 GO:0044237
Glsi02g1009 742 ProSiteProfiles S4 RNA-binding domain profile. 516 576 - -
Glsi02g1009 742 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 127 739 - -
Glsi02g1009 742 SUPERFAMILY NagB/RpiA/CoA transferase-like 392 735 IPR037171 -
Glsi02g1009 742 MobiDBLite consensus disorder prediction 344 378 - -
Glsi02g1009 742 MobiDBLite consensus disorder prediction 242 378 - -
Glsi02g1009 742 Gene3D - 529 735 IPR042529 -
Glsi02g1009 742 MobiDBLite consensus disorder prediction 319 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1009 Glsi-ChrGlsi02 6704788 6711552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1009 80 742 Eukaryotic Initiation Factors Gene Family AT5G38640 60.682 0.0 729