Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0999 ATGCGAGCGAGAACTCGTTCTCTTATCCTGCGAAACCATCGTGTCCTTCTAAATCCATATATCAACCATGTCCTCCCTTCTCCTCCTCCTCTTGATCTTCATGCAACTCGGATCTTCAATCGGTTGACTCGTGAAACGATGGACCCGATGGACATCATTGGGAAATCAAAGGAGGATGCTTCGCTTCCTAAGGCAACTATGACAAAAATTATTAAAGAGATGTTACCCCCCGATGTACGCGTTGCAAGAGATGCTCAAGATCTATTGATTGAGTGTTGTGTAGAGTTTATAAACCTCGTGTCATCAGAGTCCAATGAAGTCTGTAGCAAAGAGGAGAAACGGACAATTGCCCCCGAGCATGTATTGAAGGCTTTACAGGTTCTAGGATTTGGTGAGTATATTGAGGAAGTTTATGCAGCATATGAACAGCACAAGCTTGAGACCATGCAGGACTCTTTGAAAGCTGGCAAGTGGAGCAATGGTGTTGAGATGACCGAGGAAGAAGCATTAGCCGAGCAGCAAAGGATGTTTGCAGAGGCACGTGCTAGAATGAATGGTGGGGCCATTGCTTCCAAGCAGCCTGATGCTGACCAAAGTTTAGAGAGCTAA 609 0.4565 MRARTRSLILRNHRVLLNPYINHVLPSPPPLDLHATRIFNRLTRETMDPMDIIGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKLETMQDSLKAGKWSNGVEMTEEEALAEQQRMFAEARARMNGGAIASKQPDADQSLES 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0999 202 FunFam Negative cofactor 2 beta 52 189 - -
Glsi02g0999 202 Gene3D Histone, subunit A 38 189 IPR009072 GO:0046982
Glsi02g0999 202 PANTHER PROTEIN DR1 HOMOLOG 47 201 IPR044255 -
Glsi02g0999 202 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 60 125 IPR003958 -
Glsi02g0999 202 SUPERFAMILY Histone-fold 58 189 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0999 Glsi-ChrGlsi02 6633943 6639524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0999 47 198 CCAAT-DR1 Transcription Factor Family AT5G23090 83.766 2.37e-93 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Glsi02g0999 CBFD_NFYB_HMF 4.7e-22 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0999 02 6633943 6639524 Glsi02g0999 02 6633943 6639524 ECH