Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0998 ATGGTTGGTCATAGAAGAAGGAAGCACCACTTCGGCAGAATCCATGCGTTTACTTGTGGGAAAGCTTCATTCAAAGGGGACCATTCACTTATCGGAGGCCCTGGCTTCTCAAGGATAGTCTATTGCAACGATCCAGAACGTATTGAGGAGGGCGTTGCAGATCATGGTGACAATTACGTGAGAACTACTAAATATACACTAGCATCGTTCCTCCCCAAGTCCTTGTTTGAGCAATTCAGAAGAGTTGCCAATTTTTATTTCCTCGTCTGTGCAATTTTGTCTTTCTTCCCAGTTTCTCCTTACACAGCTGTCAGCAATGTTCTTCCTCTCGTGGTTGTGGTTGCTGCTTCAATGGGGAAAGAGCTCCTTGAAGACTGGAGGCGGAACCAACAGGATATTGAGATGAATAACAGAAAGACTCAAGTACATCGTGGAGAAGGTGTTTTTAATTATACTAAATGGAAGGATCTGAAAGTTGGAAACGTAGTAAAAGTGGAAAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTTTCATCAAGCTATGACGAAGCAATTTGCTATGTGGAGACCATGAATCTTGATGGAGAAACAAATCTTAAATTGAAACAAGCACTGGAAGAAACTTCAAAGTTGCAAGAAGATTCGAGCTTTCAAAATTTCAAGGCTATCATCAAATGTGAAGATCCAAATGCAAATTTGTACTCGTTTGTAGGCAGTCTGGATTTTGAGGATCAACAGTATCCTCTTGCACCTCAGCAGCTTCTGCTTAGGGACTCAAAGCTGAGGAACACAGATTTTATCTATGGCGTGGTAATTTTTACTGGTCATGATACAAAGGTTATGCAGAATTCAACAGACCCTCCTTCCAAGAGAAGCAAAATTGAGAAACGGATGGATAAGGTCATCTACTTCCTGTTCTTTGTCTTAGCTTTGATTTCCATTATTGGGTCCATTTTCTTTGGGATTTGGACAAGGAAAGACCTTGAAAATGGCAAAGTGAAAAGATGGTACCTTAGACCAGATAATACCACAATTTACTATGATCCAAAGAGAGCACCAGTTGCAGCAATATTGCATTTCTTGACTGCGCTTATGTTGTACAGTTACCTGATTCCCATTTCCTTGTATGTTTCAATTGAAATTGTGAAAGTTCTTCAGAGCATTTTCATCAACCAAGACGTGCAAATGTATTATGAAGAAACTGACAGGCCAGCACATGCTCGTACCTCAAATTTGAACGAAGAACTCGGCCAAGTTGATACCATACTTTCAGATAAAACAGGAACTTTAACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGCATTGCTTACGGACGTGGAGCTACGGAAGTTGAGAGAGCTCTATCCAGAAGAAAAGGATCACCTTTATATCAAGGGTTGACAGAAGAGGATGACCATGTTGCAGACATTGCTGCTGGAAAGCCATCCATTAAAGGGTTTAACTTTGTGGATGAAAGGATTATGAACAGAAACTGGATTAATGAACCTCATGCAAATGTAATCCAGAACTTCCTAAGATTGTTGGCTATATGCCATACTGCAATCCCTGAAGTTGATGAGGAAACTGGTAAAGTTTTATATGAAGCTGAATCACCGGATGAGGCAGCTTTTGTGGTTGCAGCGAGAGAACTAGGGTTTGAGTTTTATGAAAGGACACAGACAACCATTTCACTGCATGAGTTTAACCCCGTATCAAACATGAAGGAGGAAAGATCCTACAAACTTTTACATATAATAGAATTTAGCAGTGCAAGAAAGCGAATGTCTGTAATTGTAAGAGATGAGGAGGGGAATCTAATACTACTTTCCAAAGGCGCTGACAGTGTCATGTTTGAAAGACTTGCAAAGAATGGAAGGGAGTTTGAAGAGAAGACTAAGGAGCACATTAATGAGTATGCTGATGCTGGTTTGAGGACATTGTTACTTGCCTATCGCCCACTTGATGAGGAAGAATATAATCAATTTAATAAAGAGTACACAGAGGCCAAGAACTTAGTCAGTGCTGACCGGGAGCAGATTGTAGAGGAAATAGCAGAAAAGATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAACTAGCACAGGCTGGAATTAAGCTATGGGTTTTGACTGGTGATAAGATGGAGACAGCAATCAATATTGGATTTGCTTGCAGTTTACTTAGACAAGGAATGAAGCAAATCATAATTAGCTCAGACACTACAGAAACCAAATCACTGGAGAAACTGGAGGACAAGTCTGCAGCTGCAGCGGCAATTAAGGAAAGTGTTCTTCATCAGATAAGGGAGGGAAAGGCATTACTTTCTAAATCCGGTGAAAATTCTGAGGCATTAGCTCTGATCATTGATGGGAAGTCTCTTGCTTATGCACTAAAAGATGATGTCAAGGACTTGTTTCTTGAACTTGCCATTGGCTGTGCATCTGTTATATGCTGTCGTTCATCTCCCAAACAGAAAGCACTTGTTACAAGACTGGTTAAGACAATAACTGGTAGTACAACTCTAGCAATTGGTGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGCATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGTGACTTTGCAATTGCCCAATTTCGGTTTCTAGAGCGCTTACTACTTGTGCATGGACATTGGTGTTACAGAAGGATATCATCAATGATCTGCTACTTCTTTTACAAGAATATTGCCTTCGGCTTCACACTCTTCTTCTTTGAGATCTATGCCTCATTCTCAGGGCAAGCAGCCTACAATGATTGGTTCTCGTCCCTATACAACATAATCTTCACTTCACTTCCTGTGATTGCCTTAGGAGTGTTTGACCAGGATGTCTCTGCTAAATTATGTCTCAAGTTCCCATTATTATATCAAGAAGGTGTGCAAAATGTCCTATTTAACTGGAAACGAATCCTCGGTTGGGCATTCAATGGCGTGCTGAGTTCTACCTTGATCTTCTTCTTTTGCATCCGAGCAATGATGTATCAATCCTTCCGCAAAGGTGGGGAAGTTGTTGAGCTGGAAGTTCTTGGTGCTACCATGTACACTTGTGTAGTTTGGGTAGTCAATTGCCAAATGGCATTATCTATCAGTTACTTCACCTACATACAGCATATATTCATCTGGGGTGGCATTCTATTCTGGTACATATTTCTCCTGGCATATGGAGCCATGAGTCCTTCCATTTCAACGACTGCCTATAAGGTCTTCATTGAAGCTCTTGCACCCGCCCCATCTTTCTGGATCATCACTTTGCTGGTGGTTATTTCCTCTCTTGTTCCATATTTCATCTATGCCTCCATCCAGACGCGGTTTTTCCCTATGTTTCATCAAATGATACAGTGGATAAGAAAGGATGGGCAAACTCATGATCCAGAATACTGTGATGTGGTGAGACAGAGATCGATACGACACACAACTGTTGGGTACACAGCTCGTTTTGGAGCATCCAAACGCTCTTAA 3564 0.4099 MVGHRRRKHHFGRIHAFTCGKASFKGDHSLIGGPGFSRIVYCNDPERIEEGVADHGDNYVRTTKYTLASFLPKSLFEQFRRVANFYFLVCAILSFFPVSPYTAVSNVLPLVVVVAASMGKELLEDWRRNQQDIEMNNRKTQVHRGEGVFNYTKWKDLKVGNVVKVEKDEFFPADLILLSSSYDEAICYVETMNLDGETNLKLKQALEETSKLQEDSSFQNFKAIIKCEDPNANLYSFVGSLDFEDQQYPLAPQQLLLRDSKLRNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKIEKRMDKVIYFLFFVLALISIIGSIFFGIWTRKDLENGKVKRWYLRPDNTTIYYDPKRAPVAAILHFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDVQMYYEETDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGIAYGRGATEVERALSRRKGSPLYQGLTEEDDHVADIAAGKPSIKGFNFVDERIMNRNWINEPHANVIQNFLRLLAICHTAIPEVDEETGKVLYEAESPDEAAFVVAARELGFEFYERTQTTISLHEFNPVSNMKEERSYKLLHIIEFSSARKRMSVIVRDEEGNLILLSKGADSVMFERLAKNGREFEEKTKEHINEYADAGLRTLLLAYRPLDEEEYNQFNKEYTEAKNLVSADREQIVEEIAEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTTETKSLEKLEDKSAAAAAIKESVLHQIREGKALLSKSGENSEALALIIDGKSLAYALKDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTITGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDFAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEIYASFSGQAAYNDWFSSLYNIIFTSLPVIALGVFDQDVSAKLCLKFPLLYQEGVQNVLFNWKRILGWAFNGVLSSTLIFFFCIRAMMYQSFRKGGEVVELEVLGATMYTCVVWVVNCQMALSISYFTYIQHIFIWGGILFWYIFLLAYGAMSPSISTTAYKVFIEALAPAPSFWIITLLVVISSLVPYFIYASIQTRFFPMFHQMIQWIRKDGQTHDPEYCDVVRQRSIRHTTVGYTARFGASKRS 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0998 1187 CDD P-type_ATPase_APLT_Dnf-like 57 1023 - -
Glsi02g0998 1187 FunFam Phospholipid-transporting ATPase 541 699 - -
Glsi02g0998 1187 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Glsi02g0998 1187 Gene3D - 110 286 - -
Glsi02g0998 1187 SUPERFAMILY Calcium ATPase, transduction domain A 139 284 IPR008250 -
Glsi02g0998 1187 Gene3D - 699 903 IPR023214 -
Glsi02g0998 1187 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 1141 IPR023298 -
Glsi02g0998 1187 NCBIfam phospholipid-translocating P-type ATPase 57 1148 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Glsi02g0998 1187 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Glsi02g0998 1187 Pfam Phospholipid-translocating P-type ATPase C-terminal 891 1141 IPR032630 -
Glsi02g0998 1187 SUPERFAMILY HAD-like 419 918 IPR036412 -
Glsi02g0998 1187 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Glsi02g0998 1187 PRINTS P-type cation-transporting ATPase superfamily signature 749 759 - -
Glsi02g0998 1187 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Glsi02g0998 1187 Pfam Cation transport ATPase (P-type) 531 625 - -
Glsi02g0998 1187 FunFam Phospholipid-transporting ATPase 116 286 - -
Glsi02g0998 1187 SFLD Haloacid Dehalogenase 406 914 - -
Glsi02g0998 1187 SFLD p-type atpase 406 914 IPR044492 -
Glsi02g0998 1187 Gene3D - 540 698 IPR023299 GO:0000166
Glsi02g0998 1187 NCBIfam HAD-IC family P-type ATPase 829 946 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi02g0998 1187 FunFam Phospholipid-transporting ATPase 699 903 - -
Glsi02g0998 1187 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 490 701 IPR023299 GO:0000166
Glsi02g0998 1187 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0998 Glsi-ChrGlsi02 6621189 6627197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0998 10 1187 Primary Pumps ATPases AT1G68710 69.097 0.0 1774