Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0982 ATGGGGTGCTCATTTTCTGGCTTGAATGCATTATACGACACCGTAAATGGGGGAGGAGATGTGTGGATCAATGAGAACCGATTCCGCATCGTGAGGCAGCTCGGGGAAGGTGGGTTTTCCTACGTCTACTTGGTCAAGGAGGTGCTCGCCGACTCCTCCTCGGCCGTTGCTGACGGTGGTCTCTCTAAGAAGATCAAAGACTCCTCCCATGTCTCTGATGATGGAACTTATGCGATGAAAAAGGTCCTCATTCAGAACAGTGAACAGCTGGAGTTGGTGAGGGAGGAGATCCGTGTTTCATCACTTTTCAGTCATCCAAATCTGCTTCCACTTCTTGATCATGCAATAATTTCTGTTAAGCCTACCAAAGAAACATCTTGGAACCATGAAGCATACTTGTTATTTCCTGCTCATTTGGATGGAACATTGCTAGACCATGCCCAAACAATGAAAGCCAAGAAAGAGTTCTTTTCTACCTCAGATGTGCTTCAAATCCTTCGGCAGCTTGTTGCAGGACTCAAGCACATGCACAATTTAGATCCTCCGTATGCACATAATGATGTAAAACCTGGTAATGTTGTAATAACACACAGAAAAGGACAACCACCTCTTGCTATACTGATGGATTTTGGCAGTGCTCGACCTGCCAGAAGGCAAATTCGCTCTCGATCAGAGGCACTACAGTTGCAGGAATGGGCATCTGAACATTGCTCTGCTCCATTCCGAGCTCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATTTAGATGAGAGGACTGATATTTGGTCACTAGGATGCACATTGTATGCAATAATGTATGGGGTATCCCCATTTGAATATGCACTTGGAGAATCTGGAGGAAGCCTGCAATTGGCCATTATAAATGCTCAAATCAAATGGCCGGCTGGACCTAAATCTCCATATCCAGAAGCTCTTCATCAGTTTGTAACATGGATGCTTCAGCCACAGGCTGCTGTGCGTCCCCGGATAGATGATATCATTATCCACGTTGACAAGTTGATTGCCAAGTTCTCCCATTGA 1041 0.4601 MGCSFSGLNALYDTVNGGGDVWINENRFRIVRQLGEGGFSYVYLVKEVLADSSSAVADGGLSKKIKDSSHVSDDGTYAMKKVLIQNSEQLELVREEIRVSSLFSHPNLLPLLDHAIISVKPTKETSWNHEAYLLFPAHLDGTLLDHAQTMKAKKEFFSTSDVLQILRQLVAGLKHMHNLDPPYAHNDVKPGNVVITHRKGQPPLAILMDFGSARPARRQIRSRSEALQLQEWASEHCSAPFRAPELWDCPSHADLDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIINAQIKWPAGPKSPYPEALHQFVTWMLQPQAAVRPRIDDIIIHVDKLIAKFSH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0982 346 SUPERFAMILY Protein kinase-like (PK-like) 20 336 IPR011009 -
Glsi02g0982 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Glsi02g0982 346 Gene3D Transferase(Phosphotransferase) domain 1 16 345 - -
Glsi02g0982 346 SMART serkin_6 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0982 346 Pfam Protein kinase domain 67 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0982 346 CDD STKc_16 27 342 - -
Glsi02g0982 346 ProSiteProfiles Protein kinase domain profile. 28 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0982 346 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0982 Glsi-ChrGlsi02 6520518 6525433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0982 33 299 EF-hand Containing Proteins AT4G04710 25.000 7.07e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Glsi02g0982 Pkinase 2.4e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0982 02 6520518 6525433 Glsi02g0982 02 6520518 6525433 ECH