Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0968 ATGGCTAAAGCTGTGGAGGCCGTCGAGTTATGGCTTGCCTTGCAATTCCTCATCGCAGGCGACGTCGTTGGGGACAAAGAGAACAAGAATCGTGTTATCAGCGTCGATCCATATGAACTATTCCTCGACCCAACTATGATCCCTTGGATTGAATTCTGTGAAATCTCTGATGGGAGGCCTGTTTGTAACAGGCGTGGAGCTCTGAACTGCTTGTCAAATGCTTCTCCCGGATGTGAATTACGGAATCAATCTGGCTTTGGATTCAAAGTTGGAAGGCAATTCAGCTTCTGGAAAGGTATAGAATTCAAAATTCAGTTGAATTACAGTGAAGTAAAAGCAAAAATAGGAAAGGGAAAAGATTTGGATGGAGCTTCCTCAAGCGCCTCCCTTTGGTACCCAAGTCATTCAAGTGGCCAACAAGATCCAAGGCCATCTTCTCAAGGAAGTTACTTGGAAACCCATGATTTCTTGCAACCACTAGAACGTGAAGAAGGGAAAGTTAGTGCCAAGGACGAAGCAGCAGATGAAAAACAGCCACCACCTTCAGCCGAGCACCTCCTACCTGGAGGGTTTGGGACTTACAGTATTAGCCACATTTCTTATAATTTTAATAATCAAAGGGTTCCAAAGCCGGAGGCATCCCTTTTGACGGTGGCCCAAGCAAGTAGTACAGATAGGAATGATGAGAGCTCCAACTGCAGTTCTTACACCACTGGAAGTGGTTTCACTTTGTGGGAAGAGTCTGCGGTTAATAAGGGAAAGACAGGGAAGGAGAATAATGTGGCAGATAAACCCATCTCGGAAGATTCTGCTGGGGCAAAGCTAGGGCAGGGGGCGTTGACGGACCGAACGTCACATTGGTTTTCCAACACTCGTCAGAACAACTTCAACCAGAGCCCTTCTTCTCAGACAACTAGGCAGAAGAACAGGAGTTTCCTTGAAATGATTAAATCCGCAAAGGATTTGGCCCAGTATGAGGAGCTTGACAATGAAGAAGTATTCGTTCTTAAGAAAGAATGTTCCAATACCCAAACAGGGGAATTGAGAGTGAAAGTTGATGATACGAGCACTGATCAAAAGCCAAACACACCACGATCAAAACATTCTGCAACGGAGCAGCGTAGAAGGTGCAAAATCAATGACAGATTCCAGATGTTAAGAGAGCTGATTCCACACAGTGATCAGAAGAGGGATAAGGCATCTTTTTTGTCAGAGGTCATTGAGTATATTCATTTTTTACAAGAGAAGGTGCATAAGTATGAAGGGTCATACCAAATGTGGAATGACGAGCCAGAAAAATTGATGCCATGGAAAAATGATCACCGACCTGCTGAAAGTTATGTTGATCAGTCTCGAAACATAAATGGTGCGTCAGGTCCATCTCCAACGTCGATGTTTGCTTCCAAGTTTGATGAGAAAAATATCACCATCTCCCCAGCATTTCCTGGTTGCACTCAGAACATAGAATCTAACATAAGCCCTGAAACTACAGTCAAGGCAATAGATCAACATCCTGGAATAACAAACAAGGTTATGCCAATTCCTGTTTCTTCACAGCCAAATTTCAATGCATCAGCCCAAAGTGGTAGTCCAGATGGAGTAGTGTCTCAGCTCACGCATAGATTGGCATCTGACGCGGAGAATAACATATATCAACCTCACTCTTGCACTACAAAGGTGACTGCTGCAAATGATAAGCTGAAAGAGAAAGAGCTCACTATTGAAGGCGGTGCTATTAGCATATCAAGTGTGTACTCAAAGGGGTTATTGGATACATTAACACAAGCATTGCTGAGTTCAGGAGTGGATTTGTCACGGGCTAGCATCTCAGTGCAGATTGAGCTTGGTAAGCAAGCTAACATCAGACAATCTTTACCAACGTCAGGTGCTAAGCTAATTTATGAATCACTTTTGCTTAAGGATGATGAGCTTGTTTCTAGAAATCAAAGGATGGCACGCTCTAGAGTTGCTAGCGCTGAAGACTCGGACCAAGCAGTAAAGAAGCTAAGAACACGCAGAACCTAA 2025 0.4395 MAKAVEAVELWLALQFLIAGDVVGDKENKNRVISVDPYELFLDPTMIPWIEFCEISDGRPVCNRRGALNCLSNASPGCELRNQSGFGFKVGRQFSFWKGIEFKIQLNYSEVKAKIGKGKDLDGASSSASLWYPSHSSGQQDPRPSSQGSYLETHDFLQPLEREEGKVSAKDEAADEKQPPPSAEHLLPGGFGTYSISHISYNFNNQRVPKPEASLLTVAQASSTDRNDESSNCSSYTTGSGFTLWEESAVNKGKTGKENNVADKPISEDSAGAKLGQGALTDRTSHWFSNTRQNNFNQSPSSQTTRQKNRSFLEMIKSAKDLAQYEELDNEEVFVLKKECSNTQTGELRVKVDDTSTDQKPNTPRSKHSATEQRRRCKINDRFQMLRELIPHSDQKRDKASFLSEVIEYIHFLQEKVHKYEGSYQMWNDEPEKLMPWKNDHRPAESYVDQSRNINGASGPSPTSMFASKFDEKNITISPAFPGCTQNIESNISPETTVKAIDQHPGITNKVMPIPVSSQPNFNASAQSGSPDGVVSQLTHRLASDAENNIYQPHSCTTKVTAANDKLKEKELTIEGGAISISSVYSKGLLDTLTQALLSSGVDLSRASISVQIELGKQANIRQSLPTSGAKLIYESLLLKDDELVSRNQRMARSRVASAEDSDQAVKKLRTRRT 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0968 674 MobiDBLite consensus disorder prediction 652 668 - -
Glsi02g0968 674 CDD bHLH_AtBIM_like 362 437 - -
Glsi02g0968 674 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 135 672 IPR044295 GO:0003700|GO:0006351|GO:0046983
Glsi02g0968 674 MobiDBLite consensus disorder prediction 253 274 - -
Glsi02g0968 674 Pfam Helix-loop-helix DNA-binding domain 365 414 IPR011598 GO:0046983
Glsi02g0968 674 FunFam BHLH domain class transcription factor 361 433 - -
Glsi02g0968 674 Gene3D - 361 435 IPR036638 GO:0046983
Glsi02g0968 674 MobiDBLite consensus disorder prediction 351 374 - -
Glsi02g0968 674 MobiDBLite consensus disorder prediction 652 674 - -
Glsi02g0968 674 SMART finulus 369 419 IPR011598 GO:0046983
Glsi02g0968 674 MobiDBLite consensus disorder prediction 130 150 - -
Glsi02g0968 674 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 363 413 IPR011598 GO:0046983
Glsi02g0968 674 MobiDBLite consensus disorder prediction 347 374 - -
Glsi02g0968 674 MobiDBLite consensus disorder prediction 163 179 - -
Glsi02g0968 674 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 361 435 IPR036638 GO:0046983
Glsi02g0968 674 MobiDBLite consensus disorder prediction 163 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0968 Glsi-ChrGlsi02 6420337 6431111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0968 145 619 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 45.344 3.09e-95 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi02g0968 HLH 2.5e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0968 02 6420337 6431111 Glsi02g0968 02 6420337 6431111 ECH