Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0946 ATGATGAAGACACTTGAGAAGTACCACAGCTACAGTTACGGTGCGCTCGAGACTAACCAGCCAATCAATGATAATCAGAGTGGCTACCAGGAATATTTGAGTCTAAAGGCAAACGCAGAAATACTGCAACGTTCACAGAGGAACCTTCTCGGGGAAGATCTGGCCCAAATGAACACGATGGGGCTGGAGCAGCTGGAGAATCAACTGGAGGCAACACTCAGAAATATTAGGTCAACAAAGACTCAGTTCATGCTTGACCAGCTAGTTGATCTTCAAAACCGTGAGAAAGTGCTTGATGAAACTAATAAAGCTTTAAGGAGTAAGTTGGAAGAACGCAGTAACTCACAAGTAGCCCTTAAAATGGCATGGGAAGCCAAAGGGTCTAACTTCGGTCCTCCAGAAACACAGGGTCTTTTTCAGCCTTTAGGATTCAACTCCAATCAGCAAATTGGATATAATCCGGCGGGTGTTGATGAAGTAAATGGTGGAGATCAATCCTTAAATCTTCATGAATTCGTCTCTAGGTGGATGCTTTCACCACATTGA 546 0.4396 MMKTLEKYHSYSYGALETNQPINDNQSGYQEYLSLKANAEILQRSQRNLLGEDLAQMNTMGLEQLENQLEATLRNIRSTKTQFMLDQLVDLQNREKVLDETNKALRSKLEERSNSQVALKMAWEAKGSNFGPPETQGLFQPLGFNSNQQIGYNPAGVDEVNGGDQSLNLHEFVSRWMLSPH 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0946 181 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Glsi02g0946 181 Coils Coil 88 108 - -
Glsi02g0946 181 Pfam K-box region 22 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Glsi02g0946 181 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0946 Glsi-ChrGlsi02 6314260 6316427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0946 1 151 MADS-box Gene Family AT5G15800 45.912 2.54e-36 125