Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0942 ATGGAGTCTATGGGGGTATCAATCACTGGATCTGTTGCATCTCGTTGTGGCTTCGCGATCTTACTCGTCTTACTGTTCTTTTGCTCCATATTCACTTCTACAGAAGCCTATGATGCACTTGATCCAGCTGGAAACATAACAATTAAATGGGATATCATGAGCTGGACTCCAGATGGCTATGTTGCTGTTGTTACAATGTACAACTTTCAACAGTATCGCCACATTCAGACCCCTGGGTGGACATTAGGGTGGACATGGGCTAAAAAGGAAGTGATTTGGAACATGGTGGGAGCCCAAACCACAGAGCAAGGTGACTGCTCAAAGTTCAAAGGGAACGTCCCACATTGTTGCAAGAAGGATCCAACAGTGGTGGATCTACTTCCAGGAACTCCTTACAATCAGCAGATTGCAAATTGTTGCAAGGGGGGAGTCTTGAGTTCATGGGCCCAGGACCCATCCACTGCAATAGGTTCATTTCAGGTTAGTGTGGGTTCTGCTGGAACTACTAACAAAACTGTGAGGGTGCCAAAGAATTTCACCCTCAAAGCACCAGGGCCTGGATACACTTGCAGTCCTGCAAAGGTTGGGAAACCAACTAAATTTATCACAAATGACAAAAGGAGAACCACTCAAGCATTGATGACCTGGAATGTTACCTGCACATATTCTCAATTTCTTGCTCAAAAGACACCAACTTGCTGTGTTTCCCTCTCATCCTTCTATAATGATACTATAGTAAACTGCCCAACCTGCACATGTGGCTGTCAAAACAAAACAGACCCTGCGAGCTGTGTAGATCCGGACACCCCACAGTTAGCCTCAGTTGTATCGGGCAAACCTTCCAATACACCTCTGGTCCAGTGTACAAGCCATATGTGTCCAATTCGAGTGCATTGGCATGTGAAGCTCAATTATAAAGAGTACTGGAGAGTGAAGATCACAATCACAAATTTCAATTACAGGATGAACTATTCACAATGGAACCTCGTTGTGCAGCATCCCAACTTTGACAATGTAACCCAGCTTTTCAGCTTCCAGTACAAGTCATTGACACCTTACGATGGTTTAAATGATACTGGCATGCTATGGGGAGTGCAGTTCTATAACGATTTTCTTAGTTCAGCCGGACCATATGGGAATGTGCAGTCAGAACTCTTGTTTCGAAAGGACGCTTCGACCTTCACATTTGACAAGGGATGGGCTTTCCCCAGAAGAATTTATTTCAATGGGGATAACTGCGTTATGCCACCTCCAGATTCCTACCCATGGCTGCCAAATGCAAGTTCAAAACTAGTTTACTCCCTAGTAAGGACAGTCATAGCCACCTCGGTTTCTTTAGTAATCTTGGTGTCTTACTTATAG 1362 0.4457 MESMGVSITGSVASRCGFAILLVLLFFCSIFTSTEAYDALDPAGNITIKWDIMSWTPDGYVAVVTMYNFQQYRHIQTPGWTLGWTWAKKEVIWNMVGAQTTEQGDCSKFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPSTAIGSFQVSVGSAGTTNKTVRVPKNFTLKAPGPGYTCSPAKVGKPTKFITNDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNKTDPASCVDPDTPQLASVVSGKPSNTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYRMNYSQWNLVVQHPNFDNVTQLFSFQYKSLTPYDGLNDTGMLWGVQFYNDFLSSAGPYGNVQSELLFRKDASTFTFDKGWAFPRRIYFNGDNCVMPPPDSYPWLPNASSKLVYSLVRTVIATSVSLVILVSYL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0942 453 PIRSF COBRA 10 453 IPR006918 GO:0010215|GO:0016020
Glsi02g0942 453 PANTHER PROTEIN COBRA 23 437 IPR006918 GO:0010215|GO:0016020
Glsi02g0942 453 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0942 Glsi-ChrGlsi02 6283618 6286588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0942 4 449 COBRA Gene Family AT3G02210 72.606 0.0 704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0942 02 6283618 6286588 Glsi02g0942 02 6283618 6286588 ECH