Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0938 ATGTCATCGGAGTTCTGCTCTATCTTCTTCCCACCAGCTGGGTCTTCAACCTTACTCAGCTTTCACTTCGTTGTTGGGTTTCTCGTCCTTGTTGCTGTGTTTGGCTACTGGCTCGTGCCAGGCGGTCTTGCTTGGGCTTTGTCCAAGTTTCGGCGTCAAGCGCACAACAGAACCACTATTCCTGGACCTTCGGGTTTGCCTTTGCTTGGCCTCGTTTCAGCTTTTACGGGGCCTCTGACTCACAGGGCCCTTGCTAAGCTTGCTGATATCTTCAAGGCCAAGCTGTTGATGGCATTCTCGGTTGGGTTCACTCGTTTCATCATCTCGAGCCATCCTGATACAGCCAAGGAGATTTTGAACAGTTCTTCTTTCGCCGATCGACCGATTAAGGAGTCAGCTTACGAGCTTCTCTTCCACCGAGCAATGGGTTTCGCACCATTCGGAGAGTACTGGAGGAATCTGAGGAGGATCTCGTCGACCCATCTGTTCTCACCCAAGAGAATTGCTTCCTTCGGCCATTTTCGGTCCAGGGTTGGGCTCCAAATGGTGGGTCAGATCAGGGGCTTGATGGAGAAAAACGGTGAGGTCGAGGTGAGGCAAGTATTGCATTTTGGGTCTCTAAACAACGTGATGATGAGTACGTTTGGGAGGAGTTATGAATTTGATGAGGGTTGTGGGAGTGATGGGTGTGAACTTGAGGAGTTGGTAAGGGAAGGATATGATTTGCTTGGGGTTTTCAATTGGAGTGACCACTTTCCCCTGCTGGGTTGGCTGGATTTACAAAGCGTGAGGAAAAGGTGCAGAAATCTGGTAGCAAAAGTGAATGTTTTTGTTGGAAAAATCATAGTGGAGCATAGGATGAAAAGGGTTGAAAGCAAAACCATGGATGAAGGCTCCGGTGATTTTGTTGATGTGCTGCTAGATTTAGAGAAAGAGAACAGGCTGAATGACTCTGATATGGTTGCTGTTTTGTGGGAAATGATCTTTAGGGGAACTGATACAGTGGCAATCCTACTGGAATGGATTCTGGCCAGAATGGTTCTTCACCCAGAAGTTCAATCCAAAGTACAATCTGAAATTGACTCTGTTGTTGGCTCTGATCACTCTGTGTCTGATCTTGACCTTCCAAAGCTCCCTTATCTCCGAGCCATAGTGAAGGAAACGCTGAGGATGCATCCACCAGGTCCCCTTCTTTCCTGGGCTAGGCGAGCCATGCATGACACCCACATAGGCCACCACTTCATTCCAGCAGGAACCACTGCCATGGTCAACATGTGGGCCATAACCCACGACAAAGATGTGTGGTCTGAACCAGGAGAGTTCAAACCAGAGCGCTTCATGCAGGAAGATGTAGCAATTATGGGGTCTGATTTGAGATTGGCACCTTTTGGTTCAGGAAGAAGGGTGTGTCCTGGAAAAACCATGGGCTTGGCAAGTGTCGAGCTTTGGTTCGCCCAGTTACTGCAGAATTTCAAATGGGTTCCCTCTGATCATTCTGGTGTAGACTTGTCTGAGACCTTGAAGCTCTCTCTGGAGATGAAAAACTCCCTAGTCTCCAAGGCTATTGCACGGGCTGCTTGA 1581 0.4864 MSSEFCSIFFPPAGSSTLLSFHFVVGFLVLVAVFGYWLVPGGLAWALSKFRRQAHNRTTIPGPSGLPLLGLVSAFTGPLTHRALAKLADIFKAKLLMAFSVGFTRFIISSHPDTAKEILNSSSFADRPIKESAYELLFHRAMGFAPFGEYWRNLRRISSTHLFSPKRIASFGHFRSRVGLQMVGQIRGLMEKNGEVEVRQVLHFGSLNNVMMSTFGRSYEFDEGCGSDGCELEELVREGYDLLGVFNWSDHFPLLGWLDLQSVRKRCRNLVAKVNVFVGKIIVEHRMKRVESKTMDEGSGDFVDVLLDLEKENRLNDSDMVAVLWEMIFRGTDTVAILLEWILARMVLHPEVQSKVQSEIDSVVGSDHSVSDLDLPKLPYLRAIVKETLRMHPPGPLLSWARRAMHDTHIGHHFIPAGTTAMVNMWAITHDKDVWSEPGEFKPERFMQEDVAIMGSDLRLAPFGSGRRVCPGKTMGLASVELWFAQLLQNFKWVPSDHSGVDLSETLKLSLEMKNSLVSKAIARAA 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0938 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Glsi02g0938 526 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 FunFam Cytochrome P450 78A5 52 524 - -
Glsi02g0938 526 Pfam Cytochrome P450 61 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 PANTHER CYTOCHROME P450 78A7-RELATED 19 524 - -
Glsi02g0938 526 CDD CYP78 92 517 - -
Glsi02g0938 526 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 Gene3D Cytochrome P450 47 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0938 526 SUPERFAMILY Cytochrome P450 60 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0938 Glsi-ChrGlsi02 6263751 6265975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0938 9 525 Cytochrome P450 AT1G74110 65.160 0.0 691