Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0923 ATGCAAGTCGGAGGAAGAATGCAACTAACTGGGCTGGATCGGGGTTCGTCGGAACTAGGTGAGCGATTGATGAGAAGAGTTTGGGTATCCTCCAGCATTGTTGACTTTTCCAAGTTGACGTGTGAACTCCCTCCTAAATTGCAGAGTTTTGGCTTTTTCAGTGACTGGGTGGACTTGGCTGTGCTGTATGTAAAGAAGTATTCCAGTTCCTTTCAGTGTAGAGGGTGCATTCTGGTTTGGATTTCTTCCATCTGTTTCATCTTTCTCACGATGGAGCAATGTACATCTGTTGTTACGACCTATGAAGAAGAGCAACATGTGGTTGCTGCCGCTCAGCACATTTTGAGGGCACTAGCGGCAAGCAAGAACGTCAGTGATGATTTGAGAAAAACTCTTTTAGATCTTGGGATCCACTTGTCTGCAATGCCCACACTCACTGAAGGAAATAGAAAAGGGTTCAAAGAATTAGAGAGGCAGCTTAAATGTGCTGAAGGCAAGGTAATGAGTTGGGAGGAAAATGAAAATCATACGATGATATGGGACTCTGGCCCCAGCGAATCTTCTGAGTATTTAAAAGCCATTGATGAAATCCGAACACTGACTCAAAGCTTGCAAAGCTTGTGTGTGAACGAAAATTGGAAGCAGAAGGAGCTTGTTCAACGAGCTGGTGCTGTTCTGCAGACTGCAATGTCTAGGCTTGAGGAAGAGCTAGCCCACATTCTTGTTCAGCACAAGCTGTTCTTTGAGCCTAAATTTATGGCTTTCCATTCTAATAGAGTGGCTATGGTTTATGATGGTAGCCAATCTGAGGCCTGCACTGTAGATTTGTTGCATCCAGATATACTTCCAGATCTCAAGAGTATTGCCAATGTCATGTTTGCTTCAAAACACCATCATGAATTCTGTCAGGCTTTCATTACTTCCAGGAGACAAGCTTTGGATGAGTATTTTGTAATTCTTGAAATGGAAAAACTAAGCATTGAGAATGTCCTGAAAATGGAGTGGAGTTGCTTGAGCTTTGAGATAAAGAAATGGATTCGGGCTATGAAGATCGTTGTTCAGGTATATCTTGCAAGTGAGAAAAAATTGTGTAAGCAGATTCTGGGACACCTTGGATCTTTTCATCAATTTTGCTTCTCTAAAATATCACAGAGCTTTATGTTTCACCTTTTCAACTTTGGCGAGGCAATAACAATGGGAACCCGCACACCCGAAAAACTGTTTCGCTTCCTTGACATGTACGAGGTTCTGGAAAATCTTGCTGTGGATATAGATTTGTTGTTCTTTGAAGAAGGTGGTTCTTTTGTCAGGGATGAATTTCACAAACTTTTGAGGATGTTTGGTGATGCTACAAGGTCAACATTTCAGGCATTTGAAAATGCTATTGCAACTAATCCATCAGCAAACCAGTTTCCTGGAGGGGGTATTCACCATCTTACCAAGTACGTCATGAATTACATCAAGACACTTGCAGAATATAGTGATACCCTTAATCATCTGCTCCTTGCATATGAAAATCCTCCTCCAGATAATGATCATGAAACTTCATCCCTCAAAGATTGTCCAGTGGCTCGCCACCTTCAGGCAATTACCACCACTCTGGAAACCAACTTGAGCAGTAAATCCAAATTATACAGAGATGGGGCTTTACAGCATATTTTCATGATGAACAACCTTCATTACATGGTCCAAAAGGTCAAGAACTCTGAACTGAGCCTTTTCTTTGGAGATGAATGGCTTCGCCAGCATGTTGGGAAGTTTCAGAATGATGCTAGAAGCTATGAGAGGGTCACTTGGAGTTCAGTCCTTTCCATGCTGAGTGACCCCAATTGTGCTTCAAAGGCAACTCTAAAGAAAAGGTGCAGAGGTTTCTGTATTGCCTTTGAGGAAGTGTATAGGGCTCAAACAGGATGGTGTATTCCTGATCCTCAACTTAGGGAAGATCTGCAAATTTCAATTTCTCAGAAAGTGGTTCATGGATACTGGACTTTTACTGGGAGAAACTCATCCAACATTAATGACAAGTGGATTAAGTACAATGTGGATGATCTGGAGAGTTATATTGTGGATCTTTTTGAAGGTTCGCCTAGATCTCTCCTTAATCATTGGCGCAGAAAGTGA 2121 0.4196 MQVGGRMQLTGLDRGSSELGERLMRRVWVSSSIVDFSKLTCELPPKLQSFGFFSDWVDLAVLYVKKYSSSFQCRGCILVWISSICFIFLTMEQCTSVVTTYEEEQHVVAAAQHILRALAASKNVSDDLRKTLLDLGIHLSAMPTLTEGNRKGFKELERQLKCAEGKVMSWEENENHTMIWDSGPSESSEYLKAIDEIRTLTQSLQSLCVNENWKQKELVQRAGAVLQTAMSRLEEELAHILVQHKLFFEPKFMAFHSNRVAMVYDGSQSEACTVDLLHPDILPDLKSIANVMFASKHHHEFCQAFITSRRQALDEYFVILEMEKLSIENVLKMEWSCLSFEIKKWIRAMKIVVQVYLASEKKLCKQILGHLGSFHQFCFSKISQSFMFHLFNFGEAITMGTRTPEKLFRFLDMYEVLENLAVDIDLLFFEEGGSFVRDEFHKLLRMFGDATRSTFQAFENAIATNPSANQFPGGGIHHLTKYVMNYIKTLAEYSDTLNHLLLAYENPPPDNDHETSSLKDCPVARHLQAITTTLETNLSSKSKLYRDGALQHIFMMNNLHYMVQKVKNSELSLFFGDEWLRQHVGKFQNDARSYERVTWSSVLSMLSDPNCASKATLKKRCRGFCIAFEEVYRAQTGWCIPDPQLREDLQISISQKVVHGYWTFTGRNSSNINDKWIKYNVDDLESYIVDLFEGSPRSLLNHWRRK 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0923 706 PANTHER EXOCYST COMPLEX PROTEIN EXO70 150 694 IPR004140 GO:0000145|GO:0006887
Glsi02g0923 706 Coils Coil 153 173 - -
Glsi02g0923 706 Gene3D Exocyst complex component Exo70 170 700 - -
Glsi02g0923 706 Pfam Exo70 exocyst complex subunit 343 688 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi02g0923 706 SUPERFAMILY Cullin repeat-like 174 693 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0923 Glsi-ChrGlsi02 6146245 6149332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0923 91 693 EXO70 exocyst subunit family AT5G61010 43.265 1.30e-173 509