Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0907 ATGGCTTCCATGTCTCCTTGGCTTCTTGCCTTCGTTACTCTTGTGGTAGCCTCTCTTCTTTATAAGCTTCTCAAGCTCTTCAATCGCCCTTCTCGTCCTCTCCCTCCGGGTCCAAGACCATGGCCTATCGTCGGAAACATGCCTCACTTGGGTCCCGTGCCACACCACGCCCTTGCGGACTTGGCTCGAACCTATGGTCCTCTCATGCACCTCCGACTGGGCTTCGTTGACGTTGTCGTGGCCGCCTCCGCTTCGGTCGCCGAGCAGTTTGTGAAGGTTCACGACGCCAATTTCTCGAGCCGGCCGCCCAACGCTGGAGCTAAATATATGGCTTATAACTATCAGGACCTTGTGTTCGCTCCCTACGGCCCACGGTGGCGCATGCTCCGGAAAATCAGCGCCGTTCATCTATTCTCCGGCAAGGCCTTGGACGATTTTAGACATCTCCGTCAGGAAGAGGTAGCAAGATTGACACGTAATCTAGCAAGTGCTGGCTCAAACGCAGTGAACTTAGGGCAGTTGGTCAACGTGTGCACCACAAACGCCCTGGCAAGGGTGATGATAGGGCGGCGCGTGTTCAACGACGGAGCAGCCGGATGTGATCCGAGGGCTGACGAGTTCAAGTCCATGGTGGTAGAGATGATGGTGTTGGCCGGAGTTTTCAATATCGGAGACTTCATCCCTTCATTGGAGTGGCTTGACCTTCAAGGTGTGCAAGCTAAGATGAAGAAACTGCACAAGAGGTTTGATTCGTTTTTAACCAACATTATTGAGGAACACGAGGTTTCTAAGAGTGAGAACCGCAAGGACCTGTTGAGTACGCTGTTGTCGCTTAAGGAGGTCCAGGATGATGAAGGAACCAAACTCACTGACACGGAGATCAAAGCACTACTTTTGAACATGTTTGCGGCTGGGACTGACACGTCATCGAGCACAACAGAATGGGCCATAGCAGAATTGATCCGGAACCCAAAAATACTGGCCCAAGTACAACAAGAGCTGGACTCTGTCGTGGGCAGAGACCGGCTTGTGAGCGAAGCGGACTTACCCAACCTGCCCTATTTACAGGCCGTGGTGAAGGAAAACTTCCGTCTCCACCCCTCAACCCCTCTTGCCCTTCCCCGAGTTGCAGCTGAGAGTTGTGAAATCTTCGGCTACCACATTCCCAAGGGTGCTACTCTGTTGCTGAACGTCTGGGCCATATCACGTGACCCCAAAGAGTGGGCCCAACCATTAGAGTTCAAGCCCGAAAGGTTCCTACCAGGTGGTGAAAAGCCCGATGTTGACGTTAGAGGCAATGACTATGAGGTGATCCCATTTGGTGCTGGACGTAGAATATGTGCTGGTATGAGCCTGGGGCTTCGCATGGTTCAGCTGCTGACTGCAACCCTAGCCCAAGCGTTTGATTGGGAGCTGCAAGATGGGCTTAACCTAGAAAAACTTAACATGGAAGAGGCTTATGGGCTAACCCTGCAACGAAAGGTCCCGTTATCGGTGCATCCAAAGCCCAGACTCTCACCACATGTTTACTCGGATGTCATGTTATCTTTTCTTATCTCCTATTTTTGTCTCTTTCCATTGGATTGTCTTATGCCGGGAGCTACCCAGGCCTCCATCATTGATCAGTAA 1629 0.5193 MASMSPWLLAFVTLVVASLLYKLLKLFNRPSRPLPPGPRPWPIVGNMPHLGPVPHHALADLARTYGPLMHLRLGFVDVVVAASASVAEQFVKVHDANFSSRPPNAGAKYMAYNYQDLVFAPYGPRWRMLRKISAVHLFSGKALDDFRHLRQEEVARLTRNLASAGSNAVNLGQLVNVCTTNALARVMIGRRVFNDGAAGCDPRADEFKSMVVEMMVLAGVFNIGDFIPSLEWLDLQGVQAKMKKLHKRFDSFLTNIIEEHEVSKSENRKDLLSTLLSLKEVQDDEGTKLTDTEIKALLLNMFAAGTDTSSSTTEWAIAELIRNPKILAQVQQELDSVVGRDRLVSEADLPNLPYLQAVVKENFRLHPSTPLALPRVAAESCEIFGYHIPKGATLLLNVWAISRDPKEWAQPLEFKPERFLPGGEKPDVDVRGNDYEVIPFGAGRRICAGMSLGLRMVQLLTATLAQAFDWELQDGLNLEKLNMEEAYGLTLQRKVPLSVHPKPRLSPHVYSDVMLSFLISYFCLFPLDCLMPGATQASIIDQ 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0907 542 SUPERFAMILY Cytochrome P450 35 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 FunFam Red aleurone1 27 502 - -
Glsi02g0907 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Glsi02g0907 542 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 Gene3D Cytochrome P450 27 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 Pfam Cytochrome P450 35 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g0907 542 PANTHER CYTOCHROME P450 98A9 7 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0907 Glsi-ChrGlsi02 5836249 5841581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0907 11 511 Cytochrome P450 AT5G07990 68.504 0.0 740