Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0889 ATGTCAGAGCAGGAAACAGAGTCGTGGGGCTTCCTGTTTATCTGTTTCTTAATCCTTTTTTCAGGTAAAATCGTTGCCGGGGATTCCCTGAACACAGAGAGAGAAACTCTGCTAAAGCTGAAATCGTACCTGGACAATCAAATTCTGGAAGATCGAGGAAGATATATTCACTGGAACACAAACAGCCCAAATCCTTGTGAATGGTTAGGAATCTCATGCAGCCAAAACGGTACGACGAGGAGTGTGGTTGGAATAGACCTCTCTGATAGTAACATCTCCGGCGAGATATTCCACAACTTCTCGCAGCTCACTGAGCTCACACACCTTGACCTCTCCCGGAACACAATCTCTGGAGGAATTCCAGAGGATTTGAGGCGATGCCGGAAGCTCCTCCATCTCAACCTCTCTCATAATATTCTTGAGGGGGAGCTGAATTTGACTGGCCTGAGAAAATTACAAACACTAGACTTATCGGAAAACAGGTTTCGCGGGGATCTTGGGTTGAACTTTCCTGCCATTTGTGACAATTTAGTCACTTTGAATATTTCTGGGAATAACTTCACTGGTACGATTGATCACTGCTTCGAGCAATGTTTCAAGCTGCAATACTTGGATTTGAGCACTAACGATCTGAGTGGGGGTATTTGGATGGGATTCGCGAGGCTCAAAGAGTTTTCAGTTTCAGAGAACTATCTCACTGGGCCTATTCCCTCGCTAGCTTTCCCAGAAAATTGTAACCTTGAAGTTCTTGACCTTTCAGTGAATGGGTTTACTGGCAATGCCCCGAACAAAGTTTATAACTGTAGAAATTTAGTAATTCTGAATCTTTCTAGTAACAAATTTACAGGAGATATTCCCATCGAATTGGGATCCATTTCGGGTCTCGAATTTTTGTACTTGGCTAACAACAGTTTTTCAAGAGATATTCCGGAGACCCTCTTAAACTTGACCAAGTTAAAGTTCCTGGATTTGAGCAGAAACAGTTTTGGTGGAGAGATACAAGAGACACTTGGGAAATTCAAGCAGCTAAAGTCACTTCTGTTACATTCAAATTCTTATACTGGAGGATTAAATTCATCAGGAATTCTCAAATTACCAAACATTTCCCTCTTAGACCTAAGCTTCAACAATTTGTCTGGTCAATTACCTCTTGAAATGTCCCAGATGTCTACTCTGAAGTACTTATTGTTAGCCTACAATCAGTTCACCGGACTCATTCCACTCGAGTTTGGAAATTTGTCTCGGCTGCAAGTACTTGACCTCTCCTTCAACAGTTTAAGAGGGCCAATCCCACCAAGCCTTGGAAACTTGGGATCTCTCCTATGGTTGATGCTTGCAAACAACTCCTTAACCGGAGAAATCCCAAAACAGTTAGGAAACTGTTCAAGCTTGTTGTGGTTAAACCTTGCAAACAACAAGCTCATTGGAAATTTCCCTCCTGAATTGACAAACGTAGGAGGAAACGCCATGGCTACATTTGCATTAAATCGGGAAAATAATGTGATCGTTACTGGCCCTAGTGAGTGTTTAGCAATGAGGAGATGGATACCTGCAAATTACCCTCCATTCAATTTTGTGTATAGCATCCTCACAAGGAAGAATTGCAGAAGCATTTGGGACAGATTGCTCAAAGGATATGGTATTTTCCCCATTTGCACAGCTGGGTCCTTAATCCGGCTACCGAATATATCTGGATACGTTCAACTAAGTGGGAACCAGCTCGTGGGTGAAATTCCTCCGCAAATTGGGAAGATGCAACATTTTAGTATGTTTCATTTGGGGTTTAACAAATTCTCTGGGAATCTCCCTGCAGTGATGGGCAGTTTGCCACTTGTAGTCTTGAACATAACCAGAAACATGTTTTCAGGTGAGATTCCCTGGAACATTGGAAACTTGAAGTGTCTGAGGAATCTGGATTTGTCTTATAACAATTTCTCAGGGACGTTTCCCACAAGCCTCAACAACTTGACTGAACTTAGCAAGTTCAATATTTCTTACAATCCACTAATTTCTGGTGAAATACCGTCAACTGGGCAATTAGCTACTTTCGAGAAAGATTCATATTTCGGAGACCTTCTCTTGGATCTCCCAAAATTCATTGATAATATCACAGACAATAAAAATACGACTTTTCAGAGAAACCGGGGAAAACCTTTAAAATTGTCTCTGTTTTTGGTGTTTCTAGCTCTAACACTGGCTTTCTTGGTATTTGGACTTCTTTCTCTTATAGTCTGTTTATTGGTGAAAAGACCATCAGAAGATCGAGGATACCTCCTGGGGGACACAAAACACCGACACGATTCCAGTTCCGACAACTCCTCACCGTGGTTGTCTGATACAGTTAAGGTTATTCGCTTGAACAAGACAGCTTTTACACATGCTGATATCTTGAAAGCCACCGGAAACTTCTCAGACGACAGAATAATCGGAAAAGGGGGTTTCGGAACCGTGTACAGGGGAGTATTCCCGGATGGGAGAGAAGTAGCAGTGAAGAAGCTCCAAAGGGAAGGAATCGAGGGTGAAAAAGAATTCCGAGCTGAAATGGAGGTTCTAAGCGGAAATGGGTTTGGTTGGCCTCATCCAAACCTCGTCACACTCTACGGTTGGTGCCTAGATGGGTCTGAGAAAATACTGGTTTATGAGTACATGAAAGGTGGAAGCTTGGAAGATCTTGTGACTGATAGGACAAAAATGACATGGAGAAGACGCTTAGAAGTCTCCATTGATGTGGCTCGAGCTCTAGTCTATTTACACCATGAATGCTACCCTCCTGTAGTGCACAGAGACGTGAAAGCTAGCAATGTGCTGCTAGACAAGGATGGGAACGCCAAAGTCACAGACTTTGGGCTAGCCAGAGTAGTTGATGTGGGGGATAGCCATGTGACCACAATGGTGGCTGGGACAGTGGGTTACGTTGCCCCAGAATATGGGCAGACATGGCAAGCCACCACAAAAGGGGATGTGTACAGTTTTGGGGTGCTGGCTATGGAGCTAGCGACAGGAAGAAGAGCAGTGGATGGAGGGGAAGAGTGCTTGCTAGAATGGGCTAGGCGAGTCATGGGTTATGGTTACGGAAGAGATGGGCTAAGTGGCTCTGTGATACCAGTTTTGTTGATGGGGTCTGGGCTCGTTGAGGGGGCAGAGGAGATGGGCGAGTTGCTACGAATTGGGGTGAAGTGCACGGCTGAGGCACCACAGGCTAGACCAAACATGAAGGAGGTTTTGACTATGCTGATCAATATATAG 3246 0.4399 MSEQETESWGFLFICFLILFSGKIVAGDSLNTERETLLKLKSYLDNQILEDRGRYIHWNTNSPNPCEWLGISCSQNGTTRSVVGIDLSDSNISGEIFHNFSQLTELTHLDLSRNTISGGIPEDLRRCRKLLHLNLSHNILEGELNLTGLRKLQTLDLSENRFRGDLGLNFPAICDNLVTLNISGNNFTGTIDHCFEQCFKLQYLDLSTNDLSGGIWMGFARLKEFSVSENYLTGPIPSLAFPENCNLEVLDLSVNGFTGNAPNKVYNCRNLVILNLSSNKFTGDIPIELGSISGLEFLYLANNSFSRDIPETLLNLTKLKFLDLSRNSFGGEIQETLGKFKQLKSLLLHSNSYTGGLNSSGILKLPNISLLDLSFNNLSGQLPLEMSQMSTLKYLLLAYNQFTGLIPLEFGNLSRLQVLDLSFNSLRGPIPPSLGNLGSLLWLMLANNSLTGEIPKQLGNCSSLLWLNLANNKLIGNFPPELTNVGGNAMATFALNRENNVIVTGPSECLAMRRWIPANYPPFNFVYSILTRKNCRSIWDRLLKGYGIFPICTAGSLIRLPNISGYVQLSGNQLVGEIPPQIGKMQHFSMFHLGFNKFSGNLPAVMGSLPLVVLNITRNMFSGEIPWNIGNLKCLRNLDLSYNNFSGTFPTSLNNLTELSKFNISYNPLISGEIPSTGQLATFEKDSYFGDLLLDLPKFIDNITDNKNTTFQRNRGKPLKLSLFLVFLALTLAFLVFGLLSLIVCLLVKRPSEDRGYLLGDTKHRHDSSSDNSSPWLSDTVKVIRLNKTAFTHADILKATGNFSDDRIIGKGGFGTVYRGVFPDGREVAVKKLQREGIEGEKEFRAEMEVLSGNGFGWPHPNLVTLYGWCLDGSEKILVYEYMKGGSLEDLVTDRTKMTWRRRLEVSIDVARALVYLHHECYPPVVHRDVKASNVLLDKDGNAKVTDFGLARVVDVGDSHVTTMVAGTVGYVAPEYGQTWQATTKGDVYSFGVLAMELATGRRAVDGGEECLLEWARRVMGYGYGRDGLSGSVIPVLLMGSGLVEGAEEMGELLRIGVKCTAEAPQARPNMKEVLTMLINI 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0889 1081 Gene3D Ribonuclease Inhibitor 29 170 IPR032675 -
Glsi02g0889 1081 ProSitePatterns Protein kinases ATP-binding region signature. 809 832 IPR017441 GO:0005524
Glsi02g0889 1081 SUPERFAMILY L domain-like 50 357 - -
Glsi02g0889 1081 PRINTS Leucine-rich repeat signature 201 214 - -
Glsi02g0889 1081 PRINTS Leucine-rich repeat signature 413 426 - -
Glsi02g0889 1081 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 239 333 - -
Glsi02g0889 1081 SMART serkin_6 803 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0889 1081 SUPERFAMILY L domain-like 290 503 - -
Glsi02g0889 1081 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Glsi02g0889 1081 Gene3D Transferase(Phosphotransferase) domain 1 883 1081 - -
Glsi02g0889 1081 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 295 1079 - -
Glsi02g0889 1081 Pfam Leucine Rich repeat 244 259 IPR001611 GO:0005515
Glsi02g0889 1081 Pfam Protein kinase domain 804 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0889 1081 Gene3D Phosphorylase Kinase; domain 1 766 882 - -
Glsi02g0889 1081 Pfam Leucine rich repeat 150 211 IPR001611 GO:0005515
Glsi02g0889 1081 Pfam Leucine rich repeat 85 138 IPR001611 GO:0005515
Glsi02g0889 1081 Gene3D Ribonuclease Inhibitor 171 242 IPR032675 -
Glsi02g0889 1081 SUPERFAMILY Protein kinase-like (PK-like) 785 1078 IPR011009 -
Glsi02g0889 1081 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 883 1081 - -
Glsi02g0889 1081 Gene3D Ribonuclease Inhibitor 547 710 IPR032675 -
Glsi02g0889 1081 FunFam Putative LRR receptor-like serine/threonine-protein kinase 340 501 - -
Glsi02g0889 1081 CDD STKc_IRAK 809 1081 - -
Glsi02g0889 1081 Gene3D Ribonuclease Inhibitor 243 337 IPR032675 -
Glsi02g0889 1081 SUPERFAMILY L domain-like 566 677 - -
Glsi02g0889 1081 Gene3D Ribonuclease Inhibitor 338 514 IPR032675 -
Glsi02g0889 1081 ProSiteProfiles Protein kinase domain profile. 803 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0889 1081 Pfam Leucine Rich Repeat 415 437 IPR001611 GO:0005515
Glsi02g0889 1081 SMART LRR_typ_2 103 127 IPR003591 -
Glsi02g0889 1081 SMART LRR_typ_2 365 389 IPR003591 -
Glsi02g0889 1081 SMART LRR_typ_2 149 169 IPR003591 -
Glsi02g0889 1081 SMART LRR_typ_2 632 656 IPR003591 -
Glsi02g0889 1081 SMART LRR_typ_2 437 461 IPR003591 -
Glsi02g0889 1081 SMART LRR_typ_2 413 436 IPR003591 -
Glsi02g0889 1081 SMART LRR_typ_2 292 316 IPR003591 -
Glsi02g0889 1081 FunFam serine/threonine-protein kinase BRI1-like 2 763 882 - -
Glsi02g0889 1081 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0889 Glsi-ChrGlsi02 5674156 5677660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0889 29 1081 Receptor kinase-like Gene Family AT4G39400 33.562 1.39e-147 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Glsi02g0889 Pkinase 2.3e-45 CL0016