Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0883 ATGGCGCTGTTCAGAAGGTTCTTTTACCGGAAGCCGCCGGATCGGCTTCTGGAGATCTCCGAGAGAGTCTATGTTTTTGATTGCTGCTTCTCCACGGATGTCTTGGAAGAAGATGAGTACAAAATTTATATGGGGGGTATTGTAGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTGTTTAACTTCAGAGAAGGGGAGAAGCGAAGTCAAATTTTAGACATATTGTCTCAGTATGACATGACAGTTATGGACTACCCTCGGCAATATGAGGGTTGTCCACTTCTGCCTTTGGAAATGATCCATCACTTCCTTCGATCAAGTGAAAGTTGGTTGTCTTTGGAGGGGCAACAAAATGTTCTCTTGATGCACTGTGAAAGAGGAGGTTGGCCTGTGCTTGCATTTATGCTAGCAGGTCTTCTATTGTATCGTAAACAGTACAATGGGGAGCAGAAGACCCTTGAAATGGTTTACAAGCAAGCTCCTAGAGAACTTCTCCACCTTCTCTCTCCTTTGAATCCGCAGCCTTCGCAGTTGAGATATCTTCAGTACATTTCCAGGAGAAATTTGGGTTCTGAGTGGCCTCCATCAGACACACCCTTATATTTGGATTGTTTGATTCTTAGAGTCCTTCCATTATTTGACAGCGGAAAAGGTTGCAGGCCTGTTGTACATGTTTATGGTCAGGACCCTTCAAAACCTGTTAACAGAAGTTCAAAGCTTCTTTTTTCGACTTCAAATACCAAAAAACATATTCGCCACTACCAACAGGCAGAATGTATGCTTGTAAAAATTGATATCCATTGTCGTGTTCAAGGAGATGTCGTTCTTGAGTGTATACATCTGGATGAAGACTTTATTCGTGAGGAGATGATGTTTAGAGTTATGTTCCACACAGCATTTGTGCGGTCAAATATATTGGTGCTCAGCCGTGATGAAGTTGATATTTTGTGGGATGCCAAGGATCAATTTCCCAAGGATTTTAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAACCACAGTCAGGGTGAGTGAAGATGCAAATGAGACGGGAAGTGCTTCACCTGAGGAATTCTATGAGGTGGAAGAGATTTTCAGCAATGTAGTTGATGCACAGGAAGGTAAGGGAGGGTATGATTCTCCTCTGGTTCATGATAAAAATCTTAAGGAAGTCTGGAAAGAGGAAGTGGATCCTCACAGTTTTCTGGATTGTACATCAGATGATGGTATTCACAAACAGGACAGAAGGATGGATTCTGGTATTAATGCAGTGAAAGACATTATTGTTGATGATGTGAAGTACAAGCTTGATGAGAGGATGGATTCTGATCCTCATGAAGTGAAAGATATTGCTGTAGATGACGGAGATATTAAATCTACTTCCATGGAAGTCACTAATGATGTGATGGAAACTGTGGAAACAAAGAAGGAAGTCACCTCAGATGTCTATGGACAATTGGTAGATATAGAAGACAAATATGATAAATTTGGCAATACAACAGAAAAAAAATTAGACGAAGGTCAGGAGAAGCCAGATATTGCCAGACAAAAATCTGATAAACTAGCTCTTCCTGCTGCAAGAAAACAACTTTCATCAAACACGAAGCCATTGGGAGATACATTTGCAGCTAAACAAAAGATTAAGCAGCTAGAATCACAAGGCAGTCAGGCAAAACAAGCTAAGCCAAATGCAGTAACCAGGTGGATTCCTTCTAATAAGGGTTCTTACACCAATTCAATGCATGTCTCATATCCACCATCAAGGTATAATAGTGCACCAGCCGCTCTTGCCAATGCTAACCCTCCAAAGGAGAAAATTGCAGATGTCAAATTAAGGTCTGCTTCTGCTCCTGTTGTCTCAGGAACGCTTGTTTCTACTGACATGACAAATGATCTGAAAAGTCATAAGGTAGATGATTCAAAATCAGTGGACTCCATAGAAGAAATGGAAGAAAACTACTTATCATCATCATCACCATCAGTTGAAGAGACATATCTTCAATCAGCAACTCAAGCACCACAACTTAGCTCAGAGCAAGTGCCACGACCTCCTTGCCCCCCACCTCCACCTCCACCTCCACCTCCATTTCATGCTAGAAACTCTTCTACCCATGTTTTTGAACCCTTATCTTTACAGGATGATGTAACACCTCCTTCACCTCCATTTGCACTATTATCACCATCTTCCTCTTTGGATGGAGAGGTATCCACCCCACCACAACCAACAACACTGCTGCTGCCGCCGCCGCCGCCTCTACTAATTCTAGCATCAATCAGTAGACAAAACCGTGGGATCGACTTTCAACCTGCAACTTCTTCCCCTCCTTTGTTTGCCAATAGAGCAATCACATCAAAATTTTATGGACTGCCAAGTGCAGTTGCCCCACCCCCTCCTCCTCCACCACCACCACCTCCTCCAAAGTATGAAGTTTTATCTCCTCCTCTCCCTCCTTCCACTACTTTTTCTCGGGCTCCACCACCACCACCGCCTCCTCCTCCTAGGTATGGAGTTTCATCTCCTCCTCCCCTTCCTCCCACTAATCTTTCTGAAGCTCCACCACCTCAACCTCCACTTCCTCCAGAGTATGAAATTCTATCTTCTTCTCCCACTACTTCTTTTGCTCCGCCTTCACCTCCTCCGCCTCCACCTCCACCCCCATCACCTATGATTGTGCAACATAAAGCTCCACCACCCCCGCCACCACCTCCTTTTGGAAGAGCTCCATCATCACCACCTCCACCTCCACCTCCACCTCCCTTTAGTAGAGCTCCACCACCACCACCACCTTTACCTCCTTTGAGTAGAGCTCTACCACCACCACCACGATCTCCACCTCCCTTTAGTAGAGCTCCACCACCACCACCTCCACCTCCATTTAGTAATGCTCCTCCACCTCCACCTCCACCTCCTTTTGGTAATTCTCCTCCGCCTCCACCTCCTTTTGGTAGAGCTCCACCAACTCCACCTCCTCCACCTCCATCAAGTGGAGTACCACTTCCACCACCACCTCCTCCATTGCATAGAGCGCCTCCACCACCCCCACCTCCAACATATGGAGCCCCAACTCCTCCACCTCCACCATTTCGTGGAGCACCACCTCCACCACCACCTCCAGGTGGTCGAGGCCCACCTCCTCCACCACCTCCCGGTGGTCGAGGCCCACCACCTCCTCCTCCTCTTGGAGGACATGCTCCTGGTGCTCCTAGACCTCCTGGTGGTGCACCTCCACCACCTCCACCCTTAGGCTCTAAAGGCGCTAGTGCTGGAGCTGATCCAAGAGGGAGAGGGCGTGGACTTTCGCGTCTTACAGGGGCTGGTGTAACAGCACCCCGACGATCCTCCTTGAAGCCTCTGCATTGGAGTAAGGTGACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCTCAAATTGCACCAGAATTTGATGTTTCAGAGCTAGAGAGCCTTTTCTCTGCAAATGTTCCTAAACCTTCTGACTCAGGTGGTAAAGCTGGAGGTCGACGCAAATCTGTTGGGTCCAAAACTGACAAAGTCCACTTGATTGACCTGAGGCGGGCCAATAATACTGAAATTATGCTCACAAAGGTTAAGATGCCCCTTTCTGATATGATGGCTGCAGTTCTAGCTATGGATGACTCGGTATTAGATGTTGATCAGGTGGAAAATCTCATCAAATTTTGTCCTACCAAAGAGGAGATGGAACTTTTGAAGGGATACACTGGTGACAAGGAGAATTTGGGGAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCGCGAGTTGAGTCAAAATTAAGAGTATTTTCTTTCAAGATTCAGTTTGGTTCTCAGATTACTGAATTCAAGAAAAGTCTAAACACTGTCAACTCTGCCTGTGAAGAGGTTCGAAAATCTGTCAAACTAAAGGAGATAATGAAGAAAATTCTATATTTGGGGAATACATTGAATCAAGGAACAGCAAGGGGATCTGCAGTTGGATTCAAGTTGGATAGTCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAATAAGATGACACTGATGCATTATCTTTGCAAGGTTCTAGCTGACAAGTCACCTGCGCTACTTGATTTTCATCTGGACCTTGTTAGCCTGGAAGCTGCTACGAAGATACAATTAAAATCATTAGCAGAAGAAATGCAGGCAATCATCAAGGGATTAGAGAAGGTTAGGCAGGAGCTTGCTGCATCTGAAAATGATGGCCCTGTATCTGAAGTTTTCCGTAAGACATCGAAAGAATTTCTTGCTGTCGCTGAGTCACAGGTGGCATCAGTAACAAATTTGTATTCAGTGGTGGGTAGAAATGCAGATGCACTTGCACTATATTTCGGGGAGGATCCTGCCCGTTGCCCATTTGAGCAAGTTACTGCAACTCTCCTAAATTTTATAAGGTTGTTTCGGAAAGCACATGAAGAGAATTGCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGCATTAACTTGACAAAGAAGAGTGCAAGATAG 4581 0.4525 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKIYMGGIVAQLQDHFPDASFMVFNFREGEKRSQILDILSQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYNGEQKTLEMVYKQAPRELLHLLSPLNPQPSQLRYLQYISRRNLGSEWPPSDTPLYLDCLILRVLPLFDSGKGCRPVVHVYGQDPSKPVNRSSKLLFSTSNTKKHIRHYQQAECMLVKIDIHCRVQGDVVLECIHLDEDFIREEMMFRVMFHTAFVRSNILVLSRDEVDILWDAKDQFPKDFKAEVLFLDADAVIPDLTTVRVSEDANETGSASPEEFYEVEEIFSNVVDAQEGKGGYDSPLVHDKNLKEVWKEEVDPHSFLDCTSDDGIHKQDRRMDSGINAVKDIIVDDVKYKLDERMDSDPHEVKDIAVDDGDIKSTSMEVTNDVMETVETKKEVTSDVYGQLVDIEDKYDKFGNTTEKKLDEGQEKPDIARQKSDKLALPAARKQLSSNTKPLGDTFAAKQKIKQLESQGSQAKQAKPNAVTRWIPSNKGSYTNSMHVSYPPSRYNSAPAALANANPPKEKIADVKLRSASAPVVSGTLVSTDMTNDLKSHKVDDSKSVDSIEEMEENYLSSSSPSVEETYLQSATQAPQLSSEQVPRPPCPPPPPPPPPPFHARNSSTHVFEPLSLQDDVTPPSPPFALLSPSSSLDGEVSTPPQPTTLLLPPPPPLLILASISRQNRGIDFQPATSSPPLFANRAITSKFYGLPSAVAPPPPPPPPPPPPKYEVLSPPLPPSTTFSRAPPPPPPPPPRYGVSSPPPLPPTNLSEAPPPQPPLPPEYEILSSSPTTSFAPPSPPPPPPPPPSPMIVQHKAPPPPPPPPFGRAPSSPPPPPPPPPFSRAPPPPPPLPPLSRALPPPPRSPPPFSRAPPPPPPPPFSNAPPPPPPPPFGNSPPPPPPFGRAPPTPPPPPPSSGVPLPPPPPPLHRAPPPPPPPTYGAPTPPPPPFRGAPPPPPPPGGRGPPPPPPPGGRGPPPPPPLGGHAPGAPRPPGGAPPPPPPLGSKGASAGADPRGRGRGLSRLTGAGVTAPRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELESLFSANVPKPSDSGGKAGGRRKSVGSKTDKVHLIDLRRANNTEIMLTKVKMPLSDMMAAVLAMDDSVLDVDQVENLIKFCPTKEEMELLKGYTGDKENLGKCEQYFLELMKVPRVESKLRVFSFKIQFGSQITEFKKSLNTVNSACEEVRKSVKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLADKSPALLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVRQELAASENDGPVSEVFRKTSKEFLAVAESQVASVTNLYSVVGRNADALALYFGEDPARCPFEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGINLTKKSAR 1526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 1502 1526 - -
Glsi02g0883 1526 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1113 1514 IPR015425 -
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 508 530 - -
Glsi02g0883 1526 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1062 1508 - -
Glsi02g0883 1526 Gene3D - 205 336 - -
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 508 525 - -
Glsi02g0883 1526 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 687 706 - -
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 1502 1520 - -
Glsi02g0883 1526 PANTHER FORMIN-J 1 776 - -
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 639 656 - -
Glsi02g0883 1526 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Glsi02g0883 1526 FunFam Formin-like protein 1113 1500 - -
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 799 871 - -
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 1166 1187 - -
Glsi02g0883 1526 Pfam Formin Homology 2 Domain 1118 1488 IPR015425 -
Glsi02g0883 1526 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 657 686 - -
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 621 756 - -
Glsi02g0883 1526 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Glsi02g0883 1526 Coils Coil 1395 1422 - -
Glsi02g0883 1526 Gene3D Formin, FH2 domain 1115 1500 IPR042201 -
Glsi02g0883 1526 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 880 1091 - -
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 796 1118 - -
Glsi02g0883 1526 SMART it6_source 604 1524 IPR015425 -
Glsi02g0883 1526 MobiDBLite consensus disorder prediction 733 748 - -
Glsi02g0883 1526 Coils Coil 1489 1518 - -
Glsi02g0883 1526 SMART PTEN_C2_2 198 338 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0883 Glsi-ChrGlsi02 5617699 5627565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0883 1 607 FH2 protein (formin) Gene Family AT5G07740 66.234 0.0 820