Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0880 ATGGGAGGAGGACTCAAGGGGGCTGTGTTGAAGCCTCATTGTTTTCCCTCCCTTTTCCTTCTTTTTCTTCTTCTCCATTCCTTCTTCCTCTTTAGCCTTGCCAAAGGTCCTTCTTTCTCACCTCCTGTTAATTATCTCATTGATTGTGGGTCCAATAACCAGACCCAGCTCAAAGATGGGAGAATCTTCAAATCTGATCATGATACGACTTCTCTTCTATCCACCAACGAGGATGTGCAAGCTTCAGTTGACTCCATTAATCTTAATGCCTCTTCCTCTGTTCCTCCTTCATCCCTACCTTTATTTCAGACCGCAAGAATTTTCACAGAGGAATCCACATACACCTTTTACATCTCCAATACTGGTCGACTTTGGGTTCGTCTTTACTTCTTCCCTCTTCCCCACCCTTCGTATAATCTAACAAGTGCGGTTTTCACTGTTCAAACTGATCGCTTTGTGCTCTTGCATGATTTCTCTTTGAAGGATAATGGCTCATCTGTTTTCAAAGAGTACCTTCTTAATATTACTGAGAGTAGGTTCTCCTTGAAATTCATACCCAAGAAGGACTCCTTTGCATTCATCAATGCCATTGAGGTTGTCTCTGCCCCTGATCCTCTTATCCCTGATTCTGCAACTGCAGTTTCCCCACTCGGAGATTTCAAGGGGTTATTTAACTATGCCCTCCAGGTATCTTACAGAGTAAATGTTGGTGGGCCAACCATAACCCCTGACAAAGATACCTTGTTAAGAACATGGGAATCTGACAGCTCCTATAATGTCTTCCCTGAGGGCTCTGCCAATGTCTCTGTGCCAGCCAAAATCATCAAATACCCACAAACAGGGGCTTCGCCTTTGATTGCTCCGAACTCTGTTTATGCAACGGCTACGCAGATGAAGGATGCTAAAGTGATGCAACCCAATTTCAACCTCAGTTGGAGAATGAATGTGGAACAAGATTTCTCCTACTTGATAAGAATGCACTTCTGTGACATTACGAGCCAAAGCCTTAACCAATTATTCTTCAATGTGTATATAAATGAGATGGTGGGTGTATCAGCTTTAGACCTCTCTTCCCAAACCAAAGCTCTAGCCACTGCGTTTTATCAAGACTTCATGCTTAATGCATCTGCTATCACAAATGGCTCCATCTTGGTTCAGGTGGGCCCTGCAAATCTCCAGCAGGGCACGGCCAATGCTATTCTTAATGGGGTTGAGGTGATGAAGATGAGCAATAATGCCGATAGCTTGGATGATTTCTACACCGTTGATGGAGAATATAAGGGACCAGGTTCAACATCCCGGATAATGAAAATTGCTGCTGCTGTTGGGTTGGGATTGTCTGTGACTGCAATGCTGCTTGTAGCAGTGGTATGTGTCCGGTGGAAGAAGAGGCCTAATGAGTGGGAGAAGAGGAATAGCTTCTCTTCGTGGCTCCTCCCAATCCAATCAAGACGTTCTAATAGTTTACTTTCAAGCAAAAGCAGCTCTAGAAGGTCAAGCATATTCAGTTCAAGAAAGAGTAAAAATGGATACTCCGGTTACTTATCCACAAGTGGGCTTGGAAGGTTCTTCCCTTTGAATGAACTACAAGAAGCCACACAGAATTTTGATGAAAAGGCAGTGATTGGCGTTGGGGGTTTCGGGAAGGTCTATCTTGGAACGATGGAAGATGGAACCAAGGTTGCTATAAAACGAGGGAATCCAAGTTCAGAGCAAGGCATCAACGAGTTCAGAACAGAGATAGAAATGCTCTCCAAGCTCCGCCATCGCCACCTAGTCTCAATGATGGGTTTCTGCGACGAAAACTCAGAGATGATTTTGGTCTACGAATACATGGCTAATGGCCCCTTTCGCTCCCACCTTTATGGCTCCAACCTCCCTCCATTGTCATGGAAACAGAGGCTCGAGATATGCATAGGCTCTGCTCGTGGGCTCCACTATCTCCATACTGGTGCATCTGAAAGCATCATTCACCGTGATGTGAAAACCACAAACATTCTGTTGGACGAGAAGTTCGTTGCCAAAGTCTCAGACTTTGGCTTGTCAAAAGCTAATCCTGAGAAAACCCATGTGAGCACAGCCGTTAAGGGTAGCTTTGGGTACCTTGATCCTGAGTATTTCAGAAGCCAACAGCTAACAGAGAAGTCTGATGTCTACTCTTTTGGGGTAGTCCTTTTCGAAGTTCTATGCGCGAGGCCAGTTATTTGCCCAGCACTTCCAAGGGAGCAAGTGAACTTAACCGATTGGGCATTGCAGCAACGTAGAAAAGGCATGCTTCATAAGATCATCGATCCTCGTATTGTCGACACTATCAGCCCAGGATCGCTCAACAAGTTTGTCGAAGCTGCAGAGAAATGCCTGGCAGATCATGGGGTTGATAGACCTAGTATAGGAGATGTGTTATGGAACTTGGAATATGCTTTGCAGCTGCATGAATCTGCATGGAATATCGATGCTCCCGAAGATAAAACTGTAAATTTGATACCTTTAGAACACCCAAATGCAAGTAACAAGAAAGGAGACCACTCAGGTACTCAAGCAAGTGAGCAATCTGACATCGCAGACGTTGATTCTGTTTTGTTTTCTCAGATAGCACACTTTGAAGGAAGGTAA 2613 0.4462 MGGGLKGAVLKPHCFPSLFLLFLLLHSFFLFSLAKGPSFSPPVNYLIDCGSNNQTQLKDGRIFKSDHDTTSLLSTNEDVQASVDSINLNASSSVPPSSLPLFQTARIFTEESTYTFYISNTGRLWVRLYFFPLPHPSYNLTSAVFTVQTDRFVLLHDFSLKDNGSSVFKEYLLNITESRFSLKFIPKKDSFAFINAIEVVSAPDPLIPDSATAVSPLGDFKGLFNYALQVSYRVNVGGPTITPDKDTLLRTWESDSSYNVFPEGSANVSVPAKIIKYPQTGASPLIAPNSVYATATQMKDAKVMQPNFNLSWRMNVEQDFSYLIRMHFCDITSQSLNQLFFNVYINEMVGVSALDLSSQTKALATAFYQDFMLNASAITNGSILVQVGPANLQQGTANAILNGVEVMKMSNNADSLDDFYTVDGEYKGPGSTSRIMKIAAAVGLGLSVTAMLLVAVVCVRWKKRPNEWEKRNSFSSWLLPIQSRRSNSLLSSKSSSRRSSIFSSRKSKNGYSGYLSTSGLGRFFPLNELQEATQNFDEKAVIGVGGFGKVYLGTMEDGTKVAIKRGNPSSEQGINEFRTEIEMLSKLRHRHLVSMMGFCDENSEMILVYEYMANGPFRSHLYGSNLPPLSWKQRLEICIGSARGLHYLHTGASESIIHRDVKTTNILLDEKFVAKVSDFGLSKANPEKTHVSTAVKGSFGYLDPEYFRSQQLTEKSDVYSFGVVLFEVLCARPVICPALPREQVNLTDWALQQRRKGMLHKIIDPRIVDTISPGSLNKFVEAAEKCLADHGVDRPSIGDVLWNLEYALQLHESAWNIDAPEDKTVNLIPLEHPNASNKKGDHSGTQASEQSDIADVDSVLFSQIAHFEGR 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0880 870 ProSiteProfiles Protein kinase domain profile. 536 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0880 870 Pfam Protein tyrosine and serine/threonine kinase 540 731 IPR001245 GO:0004672|GO:0006468
Glsi02g0880 870 SUPERFAMILY Protein kinase-like (PK-like) 521 802 IPR011009 -
Glsi02g0880 870 PANTHER OS07G0166700 PROTEIN 522 811 IPR045272 GO:0004714|GO:0006468
Glsi02g0880 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Glsi02g0880 870 SMART serkin_6 536 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0880 870 Gene3D Phosphorylase Kinase; domain 1 498 611 - -
Glsi02g0880 870 CDD STKc_IRAK 542 805 - -
Glsi02g0880 870 FunFam Putative receptor-like protein kinase 44 203 - -
Glsi02g0880 870 MobiDBLite consensus disorder prediction 831 851 - -
Glsi02g0880 870 Pfam Malectin-like domain 47 409 IPR024788 -
Glsi02g0880 870 Gene3D Transferase(Phosphotransferase) domain 1 612 824 - -
Glsi02g0880 870 ProSitePatterns Protein kinases ATP-binding region signature. 542 564 IPR017441 GO:0005524
Glsi02g0880 870 FunFam Receptor-like protein kinase FERONIA 227 411 - -
Glsi02g0880 870 FunFam Receptor-like protein kinase FERONIA 612 825 - -
Glsi02g0880 870 Gene3D - 42 203 - -
Glsi02g0880 870 Gene3D - 226 411 - -
Glsi02g0880 870 FunFam receptor-like protein kinase FERONIA 498 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0880 Glsi-ChrGlsi02 5608068 5610680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0880 38 831 Receptor kinase-like Gene Family AT5G61350 65.025 0.0 1059
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi02g0880 Malectin_like 1.1e-37 CL0202