Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0861 ATGGAAAACGTTTCAGTCCTTTGTAAGGAAGAGGATCAGATGGATTTGCCTCCTGGGTTTCGGTTTCACCCGACTGATGAAGAGCTTATAAGTCATTATCTGTACGAGAAGGTCACTGATACCAACTTCTGTGCAAGAGCCATAGGAGAGGTGAACTTGAACACGTCTGAGCCTTGGGATTTGCCATGGAAAGCGAAAATGGGTGAAAAAGAGTGGTACTTCTTCTGCGCGAGAGACAGAAAATACCCAACTGGTTTGAGAACCAATAGAGCCACTGAATCTGGGTACTGGAAGGCCACTGGGAAAGACAGGGATATTTACAGAGGAAAATCGCTGGTTGGGATGAAGAAAACTTTGGTTTTCTACAGAGGAAGAGCACCCAAAGGAGAGAAAACCAACTGGGTCATGCACGAATTCAGACTAGAGGGTAAATTCTCTGTCCACAACCTCCCTAAAACTGCAAAGAACGAGTGGGTTATTTGCAGGGTGTTTCAGAAGAGTTGTGGCAAGAAAACCCATATTTCTGGGATAATGAGGTTGGAATCTATTGGAAATGAACTGGGTTCTTCTGTTCTACCACCGCTGACAGATTCCTCCCCTTACATTGGCAAGACCAAACCTGTTGTGACTGAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATCGATTTTCAAAGAAACCATGGAGGGATCTTTGATTCCTTAAGCAACTCCCTCTTTGAGGTTTCTTCAAATCCTTTGGACATTCTTCCAAGAATCCCTCTCTCTGGTTCATTATATTCTTCTCAAGGCCTTCAAGCTCCAGCAAATTTGCCACTACCGGGTTCTGTTTACAGTATGCAGGACCAGACGATCCTTAGGGCCTTACTTGAAAACCATGGATCAAGCTTGAGAAATAGTTTCAAAGCAGAGAGGGAAATGGTCAGCGTCTCACAAGAAACAGGTCTCACCACTGATATGAACCCTGAAATATCTTCTGTGGTGTCAAATTTTGATATGGGGAAGAGGCCTTTTGCCAATCAGCAGCACCCACCTGCTTCTGCTGCACCGGCACCAGTGGACCTGGATAGTTTGTGGAATTACTAA 1086 0.4512 MENVSVLCKEEDQMDLPPGFRFHPTDEELISHYLYEKVTDTNFCARAIGEVNLNTSEPWDLPWKAKMGEKEWYFFCARDRKYPTGLRTNRATESGYWKATGKDRDIYRGKSLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFSVHNLPKTAKNEWVICRVFQKSCGKKTHISGIMRLESIGNELGSSVLPPLTDSSPYIGKTKPVVTESAYVPCFSNPIDFQRNHGGIFDSLSNSLFEVSSNPLDILPRIPLSGSLYSSQGLQAPANLPLPGSVYSMQDQTILRALLENHGSSLRNSFKAEREMVSVSQETGLTTDMNPEISSVVSNFDMGKRPFANQQHPPASAAPAPVDLDSLWNY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0861 361 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Glsi02g0861 361 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Glsi02g0861 361 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
Glsi02g0861 361 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
Glsi02g0861 361 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 258 - -
Glsi02g0861 361 FunFam NAC domain-containing protein 100-like 25 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0861 Glsi-ChrGlsi02 5520154 5521483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0861 14 361 NAC Transcription Factor Family AT5G07680 59.312 6.94e-132 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi02g0861 NAM 1.9e-38 No_clan