Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0847 ATGGTCATGGGGAGTCAGCCACTCATGAGTTGGACTTCAATGTATGAAATGGCCAAAGATGAAGAAGACCCATTATTTCCACCTGCATGCCAGTTCCCTTCATTTGACTTCAGTGGAAATGATAACAGTGGGTATTCTGCACTAGAATGGCCATACGAATATCCCATCCAACATGACATTTCTGATTCTATCCATTTGATGGAAAGCTTACCTGACCCTTTATATGATACTCTAACCATGGAACTTGCTTCAAGCTCACAAGGATATCCGTACGATGACTTCTATGATATTAAAAAAGGACTCGATGTTTGGAATGAAATAGATGCTGGGTTTGATTCGGATAAACCGATGATGTTGTCATTTTCCAAAGATAAAGATCGAGAAGATAGGGGCGTTAATGGATGCAGAGAAGAGAGAAGTAGCAGTAATAGCAGAATGCTGTCAAGGAAGACTATTTCTCAGTATTTCTACATGCCCATTACACAAGCAGCCAAGGAGCTTAATGTGGGTGTCACACTTTTAAAGAGAAGGTGCAGGGACCTGGGAATTCGAAGGTGGCCCCACAGGAAACTGATGAGCCTTCAAACTCTAATAAACAATGTCCAGGAGCTACAGAAGGAGGAGGGAGAAGAAAGCGAAGAAAAATTAAGGAATGCAATAAAGATATTGGAGAAGGAAAAGAAGAAGATGGAAGAGATGCCAGATCTGCAACTTGAGGACACCACAAAAAGGCTCAGACAAGCTTGTTTTAAGGCCAACTATAAGAAGAGGAAGCTCAAGGGATCAACGGAACTGCAATATTCTTCTCCCAGTAGCGGCCCTCGAGAAAACATTAATAATTACGATGAAGCAGAACAAGATATCAAATCTCTGTTGCACTACCCTCATTCTTCTTATAATAGTGTGTTAGCTAGCTAG 918 0.4139 MVMGSQPLMSWTSMYEMAKDEEDPLFPPACQFPSFDFSGNDNSGYSALEWPYEYPIQHDISDSIHLMESLPDPLYDTLTMELASSSQGYPYDDFYDIKKGLDVWNEIDAGFDSDKPMMLSFSKDKDREDRGVNGCREERSSSNSRMLSRKTISQYFYMPITQAAKELNVGVTLLKRRCRDLGIRRWPHRKLMSLQTLINNVQELQKEEGEESEEKLRNAIKILEKEKKKMEEMPDLQLEDTTKRLRQACFKANYKKRKLKGSTELQYSSPSSGPRENINNYDEAEQDIKSLLHYPHSSYNSVLAS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0847 305 MobiDBLite consensus disorder prediction 261 284 - -
Glsi02g0847 305 MobiDBLite consensus disorder prediction 124 144 - -
Glsi02g0847 305 PANTHER PROTEIN RKD4 122 265 IPR044607 GO:0003700
Glsi02g0847 305 MobiDBLite consensus disorder prediction 263 279 - -
Glsi02g0847 305 Pfam RWP-RK domain 147 194 IPR003035 -
Glsi02g0847 305 Coils Coil 194 233 - -
Glsi02g0847 305 ProSiteProfiles RWP-RK domain profile. 130 214 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0847 Glsi-ChrGlsi02 5458993 5460088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0847 39 261 AtRKD Transcription Factor Family AT1G18790 47.660 8.19e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Glsi02g0847 RWP-RK 3e-21 No_clan