Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0842 ATGGACTTGCAAGTGGAGTACTTGTCGCTCTTTACAAAGGTGAACTACCCGTTGTGTTTGTGTGGGCTTGGTCTGGGCTTACACTTCAAACTTCAACTGCACATTAGGCCTCAGAAAGATAATGAGCGGCCCTTGGTTTCTTCTCTCAATTGGAGAGACTTTTCCTCTTCACTGGAAGACTTTCTTTCCTTGACTTTAGTTTTAAGGGATGCATCAGGTAAACAAGACAGGAGTTGTTGTCACAGTTGCAAGGGCCATAGCGACCTGCCTTTTGAGGATCAATATGGACCCGCTGCAGATGTAGAATTAGCATCTATCTTTGATATGGTGGTAGTGAGAAGAGAAGTAGGGAGGAGTTCAAGTTCAGAGGTGAGAAATATAAGATATGGGGAGTGCCAAAAGAATCATGCAGCAAATATCGGAGGGTATGCAGTGGATGGGTGCAGGGAGTTTATGGCAAGTGGAAGGGAGGGGACAAGTGGGGCGCTTACATGTGCTGCTTGCGGCTGTCACAGGAATTTTCACAGAAGGGAAGACCAAACTGAGGTTGTCTGTGAGTACTCTCCTCCTAATTCTGCTGGCTAG 585 0.465 MDLQVEYLSLFTKVNYPLCLCGLGLGLHFKLQLHIRPQKDNERPLVSSLNWRDFSSSLEDFLSLTLVLRDASGKQDRSCCHSCKGHSDLPFEDQYGPAADVELASIFDMVVVRREVGRSSSSEVRNIRYGECQKNHAANIGGYAVDGCREFMASGREGTSGALTCAACGCHRNFHRREDQTEVVCEYSPPNSAG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0842 194 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 129 178 IPR006456 -
Glsi02g0842 194 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 120 180 - -
Glsi02g0842 194 Pfam ZF-HD protein dimerisation region 127 179 IPR006456 -
Glsi02g0842 194 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 128 178 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0842 Glsi-ChrGlsi02 5436887 5441379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0842 109 192 Zinc finger-homeobox gene family AT1G18835 70.238 7.61e-36 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Glsi02g0842 ZF-HD_dimer 1.6e-29 No_clan