Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0829 ATGGAGGGAAGTGATGATCTCCACCACCACCATCACCACCGTCCAACCTTCCCTTTCCAACTCCTGGAGAAGAAAGAAGATCAAGAAGCTGCTTCTTGCTCTACCTCATCTCCTTACCCTTCCTTAGCCATCTCTGCCGAACCCACGACTTCCAACGCAAACCGATCCAACCAGCTCGTCCCATCCACCACCACCTCCTCGGAACCCTCCAATAAGAAACCACCTCCTAAAAGAACTTCCACCAAAGACCGCCACACCAAGGTAGACGGCCGTGGCCGACGCATTCGAATGCCCGCTCTCTGCGCCGCCCGAGTCTTCCAGCTCACCCGCGAGCTCGGCCACAAGTCCGACGGTGAAACGATTGAGTGGCTACTCCAACAGGCTGAACCCGCCGTCATCGCTGCCACTGGCACTGGAACCATCCCTGCTAACTTCACCTCCCTTAACATATCCTTAAGAAGCTCCGGGTCCACCATGTCTGTCCCATCTCAGCTAAGATCGTCCTACTTCAATCCCAACTTCTCTGCTCAACAGCGCAGAAGCTTCTTCCCCGGAATTGGGTTGTCTTCTGAGAACAGCAACACATCCACGTTTCTGAATTTCCAATCCAATAACTTGTCCACCACCCTTTTGCAAGCGAAGCAGGAATTGCGTGACGGCGGTGCTCCGACAACGTTGGATTTGTCGGAGACAACAGAAGAAGGTATAGGAAGAAAACGACGACCGCAGGAGCAAGACTTCTCGTCAACGCAGCATCAAATGGGGAGTTATTTGTTACAGTCAAGCGCAGGGGCGATTCCGGCGAGTCATGCTCAGATTCCGGCGAATATATGGATGGTGGCAAATTCAAATAACCAGGTTATGAGTGGTGATCCTATATGGACATTCCCACAAGTGAATAATAGTGCTCTGTATAGGGGTAACATGTCAAATGCTTTGCATTTTATGAATTTTCCCACCCCTATGGCCTTATTGCCTAGTCAACAATTAGGGTCATCTGCAGTTGGTGGTGGAGGTAGTGGCAGTGGAGGAGGTGGGAATATAAACGAAGGACATTTGAGTATGCTGGCGGGACTCAACCCTTATCGCCCAGTGATCGGTCTTTCGGAGTCTCAGGCGAGCGGGTCCCAATCACATCACGGTGGCGGCGATGATCGGCATGATACCACCAGCCACCATTCATAG 1185 0.519 MEGSDDLHHHHHHRPTFPFQLLEKKEDQEAASCSTSSPYPSLAISAEPTTSNANRSNQLVPSTTTSSEPSNKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRSSYFNPNFSAQQRRSFFPGIGLSSENSNTSTFLNFQSNNLSTTLLQAKQELRDGGAPTTLDLSETTEEGIGRKRRPQEQDFSSTQHQMGSYLLQSSAGAIPASHAQIPANIWMVANSNNQVMSGDPIWTFPQVNNSALYRGNMSNALHFMNFPTPMALLPSQQLGSSAVGGGGSGSGGGGNINEGHLSMLAGLNPYRPVIGLSESQASGSQSHHGGGDDRHDTTSHHS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0829 394 Pfam TCP family transcription factor 79 251 IPR017887 -
Glsi02g0829 394 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 36 379 IPR005333 GO:0003700
Glsi02g0829 394 MobiDBLite consensus disorder prediction 232 246 - -
Glsi02g0829 394 MobiDBLite consensus disorder prediction 219 252 - -
Glsi02g0829 394 MobiDBLite consensus disorder prediction 1 93 - -
Glsi02g0829 394 ProSiteProfiles TCP domain profile. 81 135 IPR017887 -
Glsi02g0829 394 MobiDBLite consensus disorder prediction 380 394 - -
Glsi02g0829 394 MobiDBLite consensus disorder prediction 75 93 - -
Glsi02g0829 394 MobiDBLite consensus disorder prediction 31 74 - -
Glsi02g0829 394 MobiDBLite consensus disorder prediction 1 30 - -
Glsi02g0829 394 MobiDBLite consensus disorder prediction 371 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0829 Glsi-ChrGlsi02 5347976 5349160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0829 15 386 TCP Transcription Factor Family AT3G47620 40.966 1.86e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi02g0829 TCP 3.5e-39 No_clan