Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0827 ATGCGTCACCGTGGATGCCACACGCTTTTAGTGTTTTCTCTCTTATCACGGTTGTCTAGGTTCGTTTGCGAGGAGGAATTTGTGTACTGGAAGAGTTGTGTAAGGCATCGCTGGTTTTGTTACATCTTCTTTGGGATCAGAGCACCGGCTCCATTGGTTGAGAAAGTCAATATGTTAGAAGATACTTCGAAAAACAGGTCTTGTTCTGGTAAAAAGAACCAAGGGAAAGTCCCTAAAAGAATTCACAAGGCTGAAAGGGAGAAAATGAAGCGTGAACATTTGAATGAGCTCTTTCTTGATCTTGCTGATGCTCTTGAACTAAGTCAGCAAAACAATGGAAAGGCGTCCATAGTGTGTGAAGCCACTAGACTGCTGAAGGACCTGCTTGCTCAGATTGATTCCCTCAAGAAGGAGAATGTCTCTCTGCTGTCTGAATCGCATTATGTGACCATGGAGAAAAATGAGCTGAAGGAGGAAAATTCTACTCTAGAGACTCAAATCGAGAAACTTCAAGGCGAGATAGAAGCACGAGTAGCTCACTCTAAACCTGACCTAAATGTACCTCCTTTAGAACTTCAGCCGCCAGAGGAAACAATTTTTTCTGCAGAGGGTCTCCAATTTTCTACAGTGGAACCTACATTGCAGCAAGGATCTGCAGTCTTAGTTGTTCCTTTTCGTCCTCATCTTCAAGCTGCTTTTTCTGCTCCCAATGTTGCCGAGCTAACCTCGAAACCTACCTCCGTAGTCAGTAAACCACATCCCAGGTATCCCACCCCTGCAGATTCGTGGCCATCGCAGCTGCTTGGAGAGCAATCAACTTCAAGTTAA 828 0.4469 MRHRGCHTLLVFSLLSRLSRFVCEEEFVYWKSCVRHRWFCYIFFGIRAPAPLVEKVNMLEDTSKNRSCSGKKNQGKVPKRIHKAEREKMKREHLNELFLDLADALELSQQNNGKASIVCEATRLLKDLLAQIDSLKKENVSLLSESHYVTMEKNELKEENSTLETQIEKLQGEIEARVAHSKPDLNVPPLELQPPEETIFSAEGLQFSTVEPTLQQGSAVLVVPFRPHLQAAFSAPNVAELTSKPTSVVSKPHPRYPTPADSWPSQLLGEQSTSS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0827 275 CDD bHLH_AtILR3_like 83 157 - -
Glsi02g0827 275 Coils Coil 125 145 - -
Glsi02g0827 275 Coils Coil 153 173 - -
Glsi02g0827 275 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 143 IPR036638 GO:0046983
Glsi02g0827 275 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 78 128 IPR011598 GO:0046983
Glsi02g0827 275 Gene3D - 70 145 IPR036638 GO:0046983
Glsi02g0827 275 PANTHER TRANSCRIPTION FACTOR BHLH47 51 273 - -
Glsi02g0827 275 MobiDBLite consensus disorder prediction 242 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0827 Glsi-ChrGlsi02 5332495 5335957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0827 52 271 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 51.037 1.65e-66 205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0827 02 5332495 5335957 Glsi02g0827 02 5332495 5335957 ECH