Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0817 ATGGGCACGAATTCCCGGTTCTGTAAATCTGGTACCGAAATGTTATTTGAGTTTGTAAAGGAAATGCCAAAGCCTGAGACCCCACTTAGATTTGATTTGGCTTCTCTTCTGGGTGCTCTCTTCTTTACATGGGTCGTCCTGCAACTTTTCCCTGCAAGGTTAAAAATCTTTACATTGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAACTTGCAAATTTCACTGGCATTTCTGGTGGCTGCTTTGTTTTCAAATGTTAAGACTGCTACAGTAATTGAATATATACGTGTCTTTGGAAATAGTCTTTTAGGTGGCTTTCTTTTCCAATTTTTGGTTCAAGATACATCATTTCCAAGAGGGTGGATAATTGTTTTGGAGTTGTATCCTGGGCTTGCTTTATATCGTGGATTATATGAGTTTGCGCAATATTCCTTCAATGCGGATACTTTGAAAACTGATGGGATGCGATGGGGAGATCTGAATGATAGCACAAATGGCATAAAAGAGGTCTTCATAATCATGTTTGTTGAGTGGTTTGTGGTGCTTTTTGTTGCTTATTACATCGATCAAGTATTGTCATCAGGAAGTGGCAAAAGTCCTCTTTTTATCTTGAAAAGATTTCAGAAAAAGCCTAAATCATCTTTCCGGAAGCCTAGTATTCAAAGGCAGGAATCTAAAGTTTTTGTTGAGATGGAGAAGCCTGATGTTAGTCAAGAGAGGGAAAAGGTTGAACAGCTGCTACTTGAACCAACTAGTAATCATGCAATTGTATGTGACAACCTAAAAAAGGTGTATCAAGGTAGGGATGGAAACCCAGAGAAATTTGCAGTGAGAGGCTTGTCTCTTGCTCTCCCTCAAGGGGAATGCTTTGGTATGCTTGGCCCCAATGGTGCTGGGAAGACCTCTTTTATCAATATGATGATTGGTCTCACAAAGCCAACCTCTGGTACAGCATTTGTTCAAGGTCTGGACATAACAACTCATATTGATGGAATATATACTAGCATGGGTGTATACCCACAGCATGACTTGCTGTGGGAAAACTTAACTGGAAGAGAGCACCTACTCTTCTATGGCAGACTTAAAAATCTGAAAGGTTCGGCCTTAACACAAGCGGTGGAAGAATCTCTGAAAAGTGTAAACCTTTTTCATGGAGGAGTTGCTGATAGACAAGCTGGAAAGTACAGTGGAGGAATGAAAAGGAGACTTAGTGTTGCAATTTCATTGATTGGAGATCCCAGAGTTGTTTATATGGATGAACCAAGTACCGGATTAGACCCTGCATCAAGAAAGAACTTATGGACTGTTGTGAAACGTGCAAAGCAGAATCGTGCAATCATTCTCACCACACATTCGATGGAAGAGGCAGAGGTCTTATGTGACCGATTAGGAATATTTGTAGATGGAAGCTTGCAGTGCATAGGAAATCCAAAGGAGCTAAAAGCCAGATATGGAGGATCCTATGTGTTCACGATGACAACATCATTGGATCATGAGAATGATGTGGAGAACTTGGTACAGAAGGTGTCCCCAAATGCTAACAAGATCTACCATATCTCTGGTACCCAGAAATTTGAGCTGCCAAAACAAGATGTTAGAATAGCTGATGTTTTCCGTGCTGTTGAAACTGCGAAGAGCAACTTCGTGGTATTCGCATGGGGTTTAGCAGATACCACTTTGGAAGATGTCTTTATTAAGGTTGCTCGCGGGGCTCAGGCATTCAACACCCTGTCATAA 1749 0.4082 MGTNSRFCKSGTEMLFEFVKEMPKPETPLRFDLASLLGALFFTWVVLQLFPARLKIFTLNDYSIQFVFYFIYINLQISLAFLVAALFSNVKTATVIEYIRVFGNSLLGGFLFQFLVQDTSFPRGWIIVLELYPGLALYRGLYEFAQYSFNADTLKTDGMRWGDLNDSTNGIKEVFIIMFVEWFVVLFVAYYIDQVLSSGSGKSPLFILKRFQKKPKSSFRKPSIQRQESKVFVEMEKPDVSQEREKVEQLLLEPTSNHAIVCDNLKKVYQGRDGNPEKFAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDITTHIDGIYTSMGVYPQHDLLWENLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADRQAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRKNLWTVVKRAKQNRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKELKARYGGSYVFTMTTSLDHENDVENLVQKVSPNANKIYHISGTQKFELPKQDVRIADVFRAVETAKSNFVVFAWGLADTTLEDVFIKVARGAQAFNTLS 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0817 582 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 260 497 IPR003439 GO:0005524
Glsi02g0817 582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 247 499 IPR027417 -
Glsi02g0817 582 SMART AAA_5 290 473 IPR003593 GO:0016887
Glsi02g0817 582 Gene3D - 250 525 IPR027417 -
Glsi02g0817 582 Pfam ABC transporter 282 426 IPR003439 GO:0005524
Glsi02g0817 582 FunFam ABC transporter A family member 7 249 525 - -
Glsi02g0817 582 ProSitePatterns ABC transporters family signature. 399 413 IPR017871 GO:0005524|GO:0016887
Glsi02g0817 582 CDD ABC_subfamily_A 264 485 - -
Glsi02g0817 582 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 227 576 IPR026082 GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0817 Glsi-ChrGlsi02 5271278 5276366 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0817 265 484 Calmodulin-binding Proteins AT2G36910 23.810 3.17e-11 64.7