Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0815 ATGGCGGATTTGCCTAATGGCCCTGCTAGCTTCTGGACACAGGCAAACGCTCTCCTTCGAAAGAATTTAACTTTCCAGAAACGAAATGTCAAGACAAATATCCGGCTCATCTTATCCCCATTTATCCTCTGTTTGCTGCTTGTTCTCCTCCAATGGGTGATCGATAATCAATTGGATAAGCCTGAAAATAAGTGTGGCTGCACTTGTACCAGGACCGAAGGCAGTCAGTGTCAGGAGAAAGCCTGTGGGATTGAGTATTCGGATTTGGATCAAGTTGCAATTTGTCCGATTCTTAATCCTCCGGAATGGCCTCCATTATTACAACTGCCTGCTCCCCAATATCGAGCCGTTCAAACAGATATTCTTCCATTTTCAGATTTGCCAAATAATTCCTGCAGGAGGACGGGGTCGTGCCCTGTAACTATTTTCTTCACTGGGAATAATCAGTCTTTCGGAGAAATTTTGTCTGGAAATATGCTCAAAAGTACCTTTCGTGTGAATGACTCTGATGTTTTGGATAGTTTGGCAAGAAATGTCCTGGGATCAGAATCAATGCCTCAATACACCAATTTTCTTGAACCTGCTTTCTTTTCGGATCTACCGATTTATTTTCTGCAAAATCAGTGCACACAGAACTCTACATTATCTATTCCGATCCAGATAGCAACAATTAATTTCAAGCAAGAGCTTAGATGTGCTCAAGGTTTACATTTATGGCGTAATAGTTCTTCTGAGATAAACAATGAGCTATATAAAGGTTATCGAAAAGGGAACACAGAGAGACAGATAAATGAGATAGTTGCAGCCTATGATTTTCTAAATTCAAATGGGAATAGATTTAATGTCAGCATATGGTACAATTCAACCTACAAGAATGATACAGGCTTTGTTCCTATTTCATTGGCACGAATTCCCCGATCTGTAAATCTGGTATCAAATGCCTACCTTCAGTTTCTCCTAGGGCCAGGTACCGAAATGTTATTTGAGTTTGTAAAGGAAATGCCAAAGCCAGAGACCCCACTTAGATTTGATTTGGCTTCTCTTTTGGGTGCTCTCTTCTTTACATGGGTCATCCTGCAACTTTTCCCTGTTGCTCTGACGTCCTTGGTATATGAGAAGCAACAGAAATTAAGAATAATGATGAAAATGCATGGTCTTGGTGATGGGCCATATTGGATGATTTCCTATGGTTATTTTCTTTCCATATCAGTGATCTATATGCTTTGTTTTGTGATATTTGGCTCGGTCATAGGGTTAAAAATCTTTACATTGAATGACTACAGCATCCAAGTCGTATTTTATTTCATCTATATAAACTTGCAAATTTCACTGGCATTTCTGGTGGCTGCTTTGTTTTCAAATGTTAAGACTGCTACAGTAATTGCATATATATGTGTCTTTGGAACTGGGCTTTTAGGTGGCTTTCTTTTCCAATTTTTGGTTCAAGATACATCATTTCCAAGAGGGTGGATAATTGTTTTGGAGTTATATCCTGGGTTTGCTTTATATCGTGGATTATATGAGTTTGCGCAATATTCCTTCAATGCGGATACTTTGGGAACTGATGGGATGCAATGGAGAGATCTGAATGATAGCACAAATGGCATAAAAGAGGTCTTGATAATCATGTTTGTCGAGTGGTTTGTGGTGCTTTTTGTTGCTTATTACATCGATCAAGTATTGTCATCAGGAAGTGGCAAAAATCCTCTTTTTTTCTTGAAAAGATTTCAGAAAAAGCCTAAATCATCTTTCCGGAAGCCTAGTATTCAAAGGCAGGAATCTAAAGTTTTTGTTGAGATGGAGAAACCTGATGTCAGTCAAGAGAGGGAAAAGGTTGAGCAGCTGCTACTTGAACCAACTAGTAATCATGCAATTGTATGTGACAACCTAAAAAAGGTGTATCAAGGTAGGGATGGAAACCCAGAGAAATTTGCAGTGAGAGGCTTGTCTCTTGCTCTCCCTCAAGGGGAATGCTTTGGTATGCTTGGCCCCAATGGTGCTGGGAAGACCTCTTTTATCAATATGATGATTGGTCTCACAAAGCCAACCTCTGGTACAGCATTTGTTCAAGGTCTGGACATAACAACTCATATTGATGGAATATATACTAGCATGGGTGTATGCCCACAGCATGACTTGCTGTGGGAAAACTTAACTGGAAGAGAGCACCTACTCTTCTATGGCAGACTTAAAAATCTTAAAGGTTTGGCCTTAACACAAGCGGTGGAAGAATCTCTGAAAAGTGTAAACCTTTTTCATGGAGGAGTTGCTGATAGACAAGCTGGAAAGTACAGTGGAGGAATGAAAAGGAGACTTAGTGTTGCAATTTCATTGATTGGAGATCCCAGACTAAAAGCCAGATATGGAGGATCCTATGTGTTCACGATGACAACATCATTGGATCATGAGAATGATGTGGAGAACTTGGTACAGAAGGTGTCCCCAAATGCTAACAAGATCTACCATATCTCTGGTACCCAGAAATTTGAGCTGCCAAAACAAGATGTTAGAATAGCTGATGTTTTCCGTGCTGTTGAAACTGCAAAGAGCAACTTCGTGGTATTCGCATGGGGTTTAGCAGATACCACTTTGGAAGATGTCTTTATTAAGGTTGCTCGCGGGGCTCAGGCATTCAACACCCTGTCATAA 2649 0.4024 MADLPNGPASFWTQANALLRKNLTFQKRNVKTNIRLILSPFILCLLLVLLQWVIDNQLDKPENKCGCTCTRTEGSQCQEKACGIEYSDLDQVAICPILNPPEWPPLLQLPAPQYRAVQTDILPFSDLPNNSCRRTGSCPVTIFFTGNNQSFGEILSGNMLKSTFRVNDSDVLDSLARNVLGSESMPQYTNFLEPAFFSDLPIYFLQNQCTQNSTLSIPIQIATINFKQELRCAQGLHLWRNSSSEINNELYKGYRKGNTERQINEIVAAYDFLNSNGNRFNVSIWYNSTYKNDTGFVPISLARIPRSVNLVSNAYLQFLLGPGTEMLFEFVKEMPKPETPLRFDLASLLGALFFTWVILQLFPVALTSLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLSISVIYMLCFVIFGSVIGLKIFTLNDYSIQVVFYFIYINLQISLAFLVAALFSNVKTATVIAYICVFGTGLLGGFLFQFLVQDTSFPRGWIIVLELYPGFALYRGLYEFAQYSFNADTLGTDGMQWRDLNDSTNGIKEVLIIMFVEWFVVLFVAYYIDQVLSSGSGKNPLFFLKRFQKKPKSSFRKPSIQRQESKVFVEMEKPDVSQEREKVEQLLLEPTSNHAIVCDNLKKVYQGRDGNPEKFAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDITTHIDGIYTSMGVCPQHDLLWENLTGREHLLFYGRLKNLKGLALTQAVEESLKSVNLFHGGVADRQAGKYSGGMKRRLSVAISLIGDPRLKARYGGSYVFTMTTSLDHENDVENLVQKVSPNANKIYHISGTQKFELPKQDVRIADVFRAVETAKSNFVVFAWGLADTTLEDVFIKVARGAQAFNTLS 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0815 882 Pfam ABC-2 family transporter protein 267 556 IPR013525 GO:0016020|GO:0140359
Glsi02g0815 882 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 625 784 IPR027417 -
Glsi02g0815 882 Gene3D - 616 787 IPR027417 -
Glsi02g0815 882 ProSitePatterns ABC transporters family signature. 764 778 IPR017871 GO:0005524|GO:0016887
Glsi02g0815 882 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 872 IPR003439 GO:0005524
Glsi02g0815 882 Pfam ABC transporter 647 784 IPR003439 GO:0005524
Glsi02g0815 882 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 783 876 IPR026082 GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0815 Glsi-ChrGlsi02 5258318 5266358 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0815 641 779 Calmodulin-binding Proteins AT2G36910 26.174 7.41e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0815 02 5258318 5266358 Glsi02g0815 02 5258318 5266358 ECH