Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0806 ATGAATTTGCAGAGTGGTTTACCGCTGCTTCTGCAACAATTCACGGCGCTTTTAGGCAAGAACTTCTTGCTTTCATGGCGGAACAGGAAGGCTTCGCTTCTCCAACTCTTATCCCCTCTCTTCTTCATGTTTCTTATATTCGCCATTGATAGGGCAATTCAGTCTCGGTACTCCACTGCTACTGCCGACGAGAGCGTCACCGATCCTCAGCCGGTGCCCTCTCCTCCTATTACTCCCTGTGAGCAAAAGTTCTTCATTAAGTTTCCTTGCTATGATTTTGTTTGGAGCGGAAACGGAAACCCCAAATTTCAGACTATTGTTGATCGTATCATGGCTAACAATCCTGGCAGGTCCATACCTCCCACTAAAGTTAAATCCTTTAGCAATGCAGCTGAAGTGGATGACTGGCTTTTCAACAATCCCATGCGCTGTCCAGGGGCCCTACATTTCACCGAAAGAAACGAGACTGTTATTGGTTATGGTGTACAGACAAATTCAACGAGTCTCCAAAGGCGAGGGCACTATGAAGATCCCACAGCCGCATTTCAACTCCCACTTCAGCTCGCTGCGGAGCGTGAAATTGCTAGATACCTGATTGGAGCACCAAACTTCAGCTGGAGCGTTTCCTTCAAGGAATTTGCACACCCTGCCATGGAAATTTTCTCTACAGTTGGTTCAATAGGTCCATCATTTTTCCTTGCAATTGCCATGTTTAACTTTGTTCTTCAGATGAGCTCTTTGGTGACAGAAAAAGAGAATAAACTTCGCCAGATAATGACGATGATGGGCCTTTATGACTCTGCTTACTGGTTATCCTGGCTCACCTGGGAGGCAGTTATTACATTTCTGTCATCACTTCTCATAGTTCTTTTTGGAATGATGTTTCAATTTGATTTTTTCCTGAAAAACAGTTTTGCAGTCCTGTTCCTCATGTTCTTCCTTTTTGAACTCAGCATGACTGGATTTGCCTTCATGTTATCTGCTTTTATTCGTAAATCATCCTCAGCCACAACTGTGGGATTCTCCGTATTTATTGTTGGCTTTGTGACTCAGCTTGTTGTACAAGCTGGATTTCCCTATAAGGATGACATTTCCAAGATTGTCCGAACAGTCTGGTCATTGTTCCCACCAAATCCTCTTGCTCAAGCTCTATATATTCTTTCAGAAGCAACTTCTACCCCTGAAGATGATGGTGTTAGCTGGAGTAAACGGGGAGAATGTGCTCCAAACGATGAAGATTGTGTGATAACAATTAATGATATTTATATGTGGCTGGTGGCTACATTCTTTTTGTGGTTCATATTGGCTATCTACTTTGATAACATAATCCCAAATGCATCTGGTGTGAGGAGATCAGTCTTATACTTCCTAAAGCCCAGTTATTGGATGGGGAAAGGAGGAGATAAAGTGAAAGAGGGTGGGGTTTGTAGTTGCTTAGGTTCAGTCCCACCACAAGAGCATATTGCACCAGATGATGAAGATGTCCTTGAAGAGGAAAACATTGTAAAACAGCAAGCAAGAGAAGGAGTGATTGACCCAAATGTTGCTGTTCAGATACGTGACCTTGCAAAAACATATCCTGGTGCACTGAAAATTGGTTGCTGCTGTAAATGCAAAAGAACTACTACTCATAATGCTGTTAAGGGTTTATGGGTGAACTTTGCAAAGGATCAGTTGTTTTGTCTTCTGGGACCCAATGGAGCTGGAAAAACTACTGCTATTAATTGTTTGACAGGGATAACTCCAGTAACTGGTGGAGATGCATTGATTTATGGATATTCCATCCGAAGCTCCACTGGCATGTCAAAAATTCGAAAGCTTATAGGTTTTTGTCCGCAGTTCGATATCCTATGGGATGCATTGTCTGGTCTAGAACACCTCCAACTCTTTGCTAGTATTAAAGGCCTATCCCCAACTTCTATCAAATCAGTTACTCAGAGGTCATTGGCAGAAGTAAGACTCACAGAGGCAGCCAAAGTGAGAGCTGGAAGTTACAGCGGGGGAATGAAACGTCGTCTTAGTGTTGCTATTGCTCTTATTGGTGATCCTAAATTAGTCATTTTGGATGAACCGACAACTGGTATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATTGAAAATGCGAAAAAAGGGCGTGCCATTGTCCTTACAACACACTCTATGGAAGAAGCTGACATTCTAAGTGACCGCATAGGAATCATGGCGAAGGGGAGGCTTCGCTGCATTGGCAACTCAATCCGGTTGAAGTCACGCTTTGGTACTGGTTTTATAGCTAATATTAGCTTCTCTGGAGACAATTCTGAACAAAGTCCTGCCAATAGAGATGCAATTTCTACTACAAATCATGAGACTGTGAAGCAATTCTTTATGAATCGTTTAGATGTAGTCCCGAATGAGGAGAACAATGCCTATCTAACTTATGTGATTCCTCATGATAGAGAGGGGCTCATGACGAGATTTTTTGAGGATCTCCAAGATAGAGAAGAAGAATTTGGCATATCAGACATCCAGCTTGGTCTTACAACTCTCGAAGAAGTATTCTTGAATATCGCAAAGCAAGCAGAGCTAGAAAGTGCAGCCGCTGAAGGGAGCTTAGTGACTCTGACCTTGACATCTGGAGAATCTGTTCGGATACCTATAGGAGCAAGGTTTGTGGGGATTCCAGGAACTGAATCTGTAGAAAACCCCAGAGGGATTATGGTAGAAGTATATTGGGAGCAAGATGATACGGGTGCCCTCTGCATTGCTGGGCACTCCCAGGAAGCTCCAGTACCTCCTGGTGTTGAACTATCGACTCCTCCAGCCTCAACAAACCGTAGAAATCTAGGCCGGGCAGGACCAGTTGATGGAATTGTGATTGATCCCAGTCAAGTTAGTACGGTCAATTTTCAGTGA 2901 0.4343 MNLQSGLPLLLQQFTALLGKNFLLSWRNRKASLLQLLSPLFFMFLIFAIDRAIQSRYSTATADESVTDPQPVPSPPITPCEQKFFIKFPCYDFVWSGNGNPKFQTIVDRIMANNPGRSIPPTKVKSFSNAAEVDDWLFNNPMRCPGALHFTERNETVIGYGVQTNSTSLQRRGHYEDPTAAFQLPLQLAAEREIARYLIGAPNFSWSVSFKEFAHPAMEIFSTVGSIGPSFFLAIAMFNFVLQMSSLVTEKENKLRQIMTMMGLYDSAYWLSWLTWEAVITFLSSLLIVLFGMMFQFDFFLKNSFAVLFLMFFLFELSMTGFAFMLSAFIRKSSSATTVGFSVFIVGFVTQLVVQAGFPYKDDISKIVRTVWSLFPPNPLAQALYILSEATSTPEDDGVSWSKRGECAPNDEDCVITINDIYMWLVATFFLWFILAIYFDNIIPNASGVRRSVLYFLKPSYWMGKGGDKVKEGGVCSCLGSVPPQEHIAPDDEDVLEEENIVKQQAREGVIDPNVAVQIRDLAKTYPGALKIGCCCKCKRTTTHNAVKGLWVNFAKDQLFCLLGPNGAGKTTAINCLTGITPVTGGDALIYGYSIRSSTGMSKIRKLIGFCPQFDILWDALSGLEHLQLFASIKGLSPTSIKSVTQRSLAEVRLTEAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKKGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGNSIRLKSRFGTGFIANISFSGDNSEQSPANRDAISTTNHETVKQFFMNRLDVVPNEENNAYLTYVIPHDREGLMTRFFEDLQDREEEFGISDIQLGLTTLEEVFLNIAKQAELESAAAEGSLVTLTLTSGESVRIPIGARFVGIPGTESVENPRGIMVEVYWEQDDTGALCIAGHSQEAPVPPGVELSTPPASTNRRNLGRAGPVDGIVIDPSQVSTVNFQ 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0806 966 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 492 859 IPR026082 GO:0016020|GO:0055085|GO:0140359
Glsi02g0806 966 CDD ABC_subfamily_A 517 751 - -
Glsi02g0806 966 SMART AAA_5 556 740 IPR003593 GO:0016887
Glsi02g0806 966 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 517 763 IPR003439 GO:0005524
Glsi02g0806 966 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 543 745 IPR027417 -
Glsi02g0806 966 Pfam ABC-2 family transporter protein 30 438 IPR013525 GO:0016020|GO:0140359
Glsi02g0806 966 FunFam ABC transporter A family member 2 507 771 - -
Glsi02g0806 966 Pfam ABC transporter 550 692 IPR003439 GO:0005524
Glsi02g0806 966 ProSitePatterns ABC transporters family signature. 665 679 IPR017871 GO:0005524|GO:0016887
Glsi02g0806 966 Gene3D - 505 789 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0806 Glsi-ChrGlsi02 5205788 5211681 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0806 558 762 Calmodulin-binding Proteins AT2G36910 22.368 1.32e-07 53.9