Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0794 ATGGCAAGAAAGAAAATGGGTACTGTAGCATGGGTCTTCTTGGTGATTTCTAGAGCTCTTTTCTGCTCTTCCTCCTTTGCTCTCACTCAAGATGGTAAGAACTGGGAACCCTTAAGCTGTCTTCCATACTTAGGTCTCACGTTGTTGGAAATCAAAAGCACTTTGAATGACACCATGAGTTTTCTTAGCAACTGGCAAGAGTCTGATGAATCTCCCTGCTCATGGACTGGTATTAGTTGTCATCCCGGGGACCAACGAGTTCGCTCAATAAATCTGCCTTACATGCAACTGGGAGGGATTATATCTCCTAGCATTGGAAAACTCAGTAGACTACAAAGACTGGCTCTTCATCAGAACAGCTTGCATGGAATTATTCCTAATGAAGTTACCAATTGTACTGAGCTAAGAGCACTGGATTTTTCAAGCAACTCATTAAAGGGTGCTATACCTTCATCTATAGGCCGTCTCACACATTTGCAAGTTCTGAACTTGTCTACCAATTTTTTTTCTGGTGAAATCCCAGACATTGGAGTACTAAGCACTTTTGGAAACAACTCGTTTATTGGCAATTTAGATCTTTGTGGCCGGCAAGTTCAAAAACCATGTCGAACCTCACTTGGTTTCCCTGTGGTGTTACCACATGCTGAAAGTGACGAAGCTACAGGCAAGTCAGATCAGATCACAGGATATCTTTCGTTCATAATATTCTGCTTCCCTCCCAAAAGATCTTCACATTACATGAAGGCTGTGCTAATTGGTGCAATGTCCACAATGGGACTTGCACTTGTCATAATTCTATCATTCCTCTGGATTTGTTTGCTGTCAAAGAAGGAAAGGGCTGCTAGGAGATACACAGAAGTGAAGAAACAAACTGATCCAGAAGCAGGTAAAAAACTTATCACCTTTCACGGTGATCTGCCATACCCATCATCTGAGATCATAGAAAAGCTGGAGTCTCTTGATGAAGAGGATGTAGTAGGATCAGGAGGATTTGGTACTGTTTATCGAATGGTCATGAATGATTGTGGAACATTTGCTGTTAAGCGCATTGATAGAAGTCGTGAAGGATCTTATCAGGTTTTTGAAAGGGAAATAGAGATCTTGGGTAGCATCAAGCACATAAATTTAGTTAACCTGCGTGGTTACTGCAGGATTCCTTCTTCAAAGCTTCTCATCTATGATTATGTGGCAATGGGTAGCTTAGATGATCTCTTGCATGAAAATGCTGAACAGAAGTTATTGAATTGGGGTGCTCGCCTAAAAATAGCCCTTGGTTCTGCCCGGGGGTTGGCATATTTACACCATGACTGCTGCCCAAAAATTGTGCATCGTGACATAAAATCCAGCAACATACTCCTTGATGAAAACTTGGAGCCTCGTGTCTCTGATTTCGGGCTTGCGAAGCTTTTGGTTGATGAAGATGCTCATGTTACAACAGTGGTTGCTGGCACATTTGGCTATCTGGCACCAGAGTATCTACAAAGTGGGAGAGCCACAGAGAAATCGGATGTATATAGCTTTGGAGTTCTATTGCTTGAACTAGTAACAGGAAAGAGACCTACAGATGCTTCCTTTGTAAAGAGAGGTTTAAATGTTGTTGGTTGGATGAACACATTACTGAGAGAGAACAGATTGGAAGATGTAGTAGACAAAAGATGCAAAGATGCAGATGCAGGAACTGTTGAAGTAATTCTAGACCTAGCAGCAAGATGCACAGATGCAAACCCGGATGAGCGTCCATCAATGAACCAGGTATTGCAGTTGTTGGAACAAGAGGTTATGTCTCCTTGCCCAAGTGATTTCTATGAATCCCATTCCGATCACTCGTGCTTGGACATTGCAATGGTTGGGAATTTCAGAGTGTTTATGTCTGGTATTGGCATTGCTTTTGATGATAAAAAGTTGGCCTTTGGCTAG 1917 0.4215 MARKKMGTVAWVFLVISRALFCSSSFALTQDGKNWEPLSCLPYLGLTLLEIKSTLNDTMSFLSNWQESDESPCSWTGISCHPGDQRVRSINLPYMQLGGIISPSIGKLSRLQRLALHQNSLHGIIPNEVTNCTELRALDFSSNSLKGAIPSSIGRLTHLQVLNLSTNFFSGEIPDIGVLSTFGNNSFIGNLDLCGRQVQKPCRTSLGFPVVLPHAESDEATGKSDQITGYLSFIIFCFPPKRSSHYMKAVLIGAMSTMGLALVIILSFLWICLLSKKERAARRYTEVKKQTDPEAGKKLITFHGDLPYPSSEIIEKLESLDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRSREGSYQVFEREIEILGSIKHINLVNLRGYCRIPSSKLLIYDYVAMGSLDDLLHENAEQKLLNWGARLKIALGSARGLAYLHHDCCPKIVHRDIKSSNILLDENLEPRVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDASFVKRGLNVVGWMNTLLRENRLEDVVDKRCKDADAGTVEVILDLAARCTDANPDERPSMNQVLQLLEQEVMSPCPSDFYESHSDHSCLDIAMVGNFRVFMSGIGIAFDDKKLAFG 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0794 638 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 44 193 - -
Glsi02g0794 638 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 396 600 - -
Glsi02g0794 638 Gene3D Phosphorylase Kinase; domain 1 280 395 - -
Glsi02g0794 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Glsi02g0794 638 Pfam Leucine rich repeat N-terminal domain 46 80 IPR013210 -
Glsi02g0794 638 SUPERFAMILY Protein kinase-like (PK-like) 304 590 IPR011009 -
Glsi02g0794 638 Gene3D Transferase(Phosphotransferase) domain 1 396 599 - -
Glsi02g0794 638 Gene3D Ribonuclease Inhibitor 45 205 IPR032675 -
Glsi02g0794 638 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 16 179 - -
Glsi02g0794 638 SMART serkin_6 320 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0794 638 SUPERFAMILY L domain-like 40 206 - -
Glsi02g0794 638 ProSiteProfiles Protein kinase domain profile. 320 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0794 638 Pfam Protein kinase domain 322 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0794 638 Pfam Leucine rich repeat 109 167 IPR001611 GO:0005515
Glsi02g0794 638 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0794 Glsi-ChrGlsi02 5148089 5152591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0794 10 598 Receptor kinase-like Gene Family AT2G35620 44.372 0.0 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Glsi02g0794 Pkinase 2e-50 CL0016