Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0788 ATGTCCCCCGTTATTCCTACTGTGTTATCTGCAGTATATCCTCCAGGCCTACAGGGAGGGAGAGAGACCCACAAGGCAAACCTGCACTCGTTGATAGGCATGGATTACTATAACATTCTGAAAGTGAATCGAAATGCGAGTGACGACGATTTGAAGAAGGCGTATAAGAGGTTAGCAATGATTTGGCACCCTGACAAGAACCCAGTTAACAATAAGGAGGCTGAGGCCAAATTCAAGCGAATTTCCGAAGCTTACGACGTTTTAAGCGATCCCCAGAAGCGTCAGATCTATGATCTCTACGGTGAGGAGGCCCTCAAGTCTGGTCAGTTCCCGCCACCTCCGCAATCCTCATCTTCTTCCTCGTCCTCATCTTCTCGTGCTTACCAACATTTCCAAAACCAACAGCGCCAGAATTCGACAACGCCGTTTCGATTCAATCCTCGGGACGCCGACGACATTTACGCGGAGTTTTTTGGGTCGGAAACTAATGGGAGTGGTGGTGGTGTAGGTGGGAGAAATGGAGGATATAGGGATGGGTTCTTTAGGACATCAAATGGTTCGGCGTCTGCCGGAGCCGGAAAGAAGGCTGCGGCGGTGGAGAGTCTTTTGCCGTGTAGCTTGGAAGAGCTTTACAAAGGTGTGAAGAAGAAGATGAAGATCTCAAGGAATGTCTGTGACGCTTTTGGTAAGTTTCGGACTGTGGAGGAGATATTGACCATTGAGATAAAACCTGGTTGGAAGAAGGGAACGAAGATTACCTTCCCTGAGAAGGGTAATCATGAGCCTGGTGTCACTCCAGCAGATCTTATATTTGTGGTGGATGAGAAACCACATGCCCGTTATAGGAGGGATGGTAATGATCTGGTAATCAACCAGGAGATAAATCTTCTGGAGGCCCTTACAGGTAAAACCTTAGACCTTACCGCCTTGGATGGAAGGGATCTCATGATCCCTCTGACAGATATCGTCAAACCTGGTGCTGAGATTGTAGTCCCTAATGAGGGAATGCCCATTTCAAAAGAGCCGGGGAAGAAGGGGAATTTGAGAATTAAGTTTGACGTCAAGTATCCTTCCAGGCTAACCCCAGAGCAGAAATCTGAACTAAGGAGAGTTTTGGGGGGAAATGGAATCTCGTATGTTTGA 1143 0.4768 MSPVIPTVLSAVYPPGLQGGRETHKANLHSLIGMDYYNILKVNRNASDDDLKKAYKRLAMIWHPDKNPVNNKEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPPQSSSSSSSSSSRAYQHFQNQQRQNSTTPFRFNPRDADDIYAEFFGSETNGSGGGVGGRNGGYRDGFFRTSNGSASAGAGKKAAAVESLLPCSLEELYKGVKKKMKISRNVCDAFGKFRTVEEILTIEIKPGWKKGTKITFPEKGNHEPGVTPADLIFVVDEKPHARYRRDGNDLVINQEINLLEALTGKTLDLTALDGRDLMIPLTDIVKPGAEIVVPNEGMPISKEPGKKGNLRIKFDVKYPSRLTPEQKSELRRVLGGNGISYV 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0788 380 ProSitePatterns Nt-dnaJ domain signature. 78 97 IPR018253 -
Glsi02g0788 380 SUPERFAMILY HSP40/DnaJ peptide-binding domain 203 278 IPR008971 GO:0006457|GO:0051082
Glsi02g0788 380 SMART dnaj_3 34 93 IPR001623 -
Glsi02g0788 380 CDD DnaJ 35 90 IPR001623 -
Glsi02g0788 380 MobiDBLite consensus disorder prediction 105 145 - -
Glsi02g0788 380 Gene3D - 197 276 - -
Glsi02g0788 380 PRINTS DnaJ domain signature 93 112 IPR001623 -
Glsi02g0788 380 PRINTS DnaJ domain signature 73 93 IPR001623 -
Glsi02g0788 380 PRINTS DnaJ domain signature 55 70 IPR001623 -
Glsi02g0788 380 PRINTS DnaJ domain signature 37 55 IPR001623 -
Glsi02g0788 380 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 34 372 - -
Glsi02g0788 380 FunFam Dnaj homolog subfamily b member 195 276 - -
Glsi02g0788 380 SUPERFAMILY Chaperone J-domain 34 115 IPR036869 -
Glsi02g0788 380 Gene3D DnaJ domain 33 169 IPR036869 -
Glsi02g0788 380 FunFam DNAJ heat shock family protein 277 372 - -
Glsi02g0788 380 ProSiteProfiles dnaJ domain profile. 35 101 IPR001623 -
Glsi02g0788 380 Gene3D - 278 358 - -
Glsi02g0788 380 SUPERFAMILY HSP40/DnaJ peptide-binding domain 280 367 IPR008971 GO:0006457|GO:0051082
Glsi02g0788 380 Pfam DnaJ domain 35 98 IPR001623 -
Glsi02g0788 380 Pfam DnaJ C terminal domain 202 357 IPR002939 -
Glsi02g0788 380 CDD DnaJ_C 199 360 - -
Glsi02g0788 380 MobiDBLite consensus disorder prediction 110 145 - -
Glsi02g0788 380 FunFam DnaJ subfamily B member 13 34 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0788 Glsi-ChrGlsi02 5117903 5122656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0788 36 105 C2H2 Transcription Factor Family AT1G74250 36.486 4.29e-09 56.2