Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi02g0785 | ATGGGGCATAAAAAGCGAAACTCTCCGCGTTCCAAACAATCTGCGGCGGCGGCTTCTCCGGTGGCACAATCTGCCATCGGCGGAGCCGCCAATGGTCCCACTTCAGCTGAAACCAACTTGAGCAAGAATTCTAACAACACTCCTGAAAACCCAACTAAGGTCGAATTGTCCCCTCCATCAGAGGGTTCGGCTTACTCCACGATCAAGCTTGAATGTGAGCGAGCTCTCAATGCGATTCGTCGCGGTAACCACACCAAGGCACTGAGGCTTATGAAGGAGTCATGCTCCAGATACGATAACTCGGTTTACTCCGCTTTGATTCACCGAGTTCAGGGCACCGTGTGTGTCAAAGTGGCGTCGATTATTGACGACCCAAGTGCCAAGCAACGACATTTGAAGAATGCAATTGAGTCGGCACGAAAAGCAGTTGGGCTGTCACCCAATTCTATTGAGTTTGCACATTTTTATGCCAATTTGCTATACGAGGCGGCAAGTGATGGGAAGGAGTACGAGGAGGTGGTACAGGAGTGTGAGAGGGCGCTCTCGATTGTAAACCCAGCTGATCCTGCTAAGGAGTGCTTGCAGGATGAGAGCCAACAGAAATTATCAACTGCAGAAGCCCGGATAGCACATGTGCAGAATGAGTTGCGGCAGTTAATCCAGAAGTCAAACATAGCTTCCTTGTCAACTTGGATGAAAACTCTAGGTAATGGGGAGGATAAATTTCGTTTGATTCCATTAAGGAGGGGTACAGAGGACCCAATGGAGGTGAGATTAGTTCAAACTCGAAGGCCAAATGAGATCAAGAAGGTGACCAAGACGCCAGAAGAGAGAAGAAAAGAAATTGAAGTTCGAGTGGCTGCTGCAAGGTTGTTGCAGCAAAAGTCAGAGTCACCCAAATCTCAGAATGAAGGAGATAGGGATGACAGAACATTGGATTCATCTTTAGGATCTGGTCAGAGGATAGTTGATAGACGGAAGTATGGTCATATGCGAAAGAATGGTTCAACAGCTGAAAGGAGGGATTGGGTACGGTCGTATTGGAATTCAATGAGTATTGATATGAAGAGAGACTTGCTTAGGGTTAGGGTTCATGATCTCAAGTCCCACTTTGGGTCTTCAAAGGATACTTTGCTGAATGATGTTTTATCAGAAGCTTTCTCCTATGCTGAGGCCAATAAAACATGGAAATTCTGGCTTTGCTTCCATTGTAATGATAAATATACAGATTCGGAATCTCACATGCAACATGTGCAGGAACACATGGGAAATCTCTTACCAAAAATGCAGCGACTCTTGCCTCAAAATGTTGATAATGAGTGGATTGAGATGATTCTTAATTGTTCTTGGAGGCCTCTGGATGTCTCAGCTGCAGTTAAAATGCTTGAAAATCAAACAAAATGCAAAGATTCTGTATTCCTTGAGGGTCATCATACTGAGAAGTATGGTGGTTGTTTTAAAGATGCAAGCGATTCTTATCCTGAGGAAAACAAATTGGGGCATGGTCTTGTTAATTATACAGCAGAAAGCAGTAACTATTGTCAACTTGCAGAGAATGATATTAGGGAAGGTCTCCAAGTCCGAGAATGTACAGCATATCCTGTTGCCGATAGTTGGCCAATTTCTGATGACTCTGAGCGTGCAAAAATTCTTGAGAAAATTCATTCAGCATTTGAGATGCTTATTAGACACAAATACCTTGCTGCTAGCCATCTTAACAAGGTCATACAGTTTACTATGGATGAGATACAGGGTCTTGCTGCTGGTTCTCAGCTTCTAAACCATGGCGTAGACCAAACAGCAACATGCATATGCTTTCTTGGAGCTTCTCAGCTTAGGAAAATTCTCAAATTTTTGCAAGAACTGTCTAATGCGTGTGGTTTGGGTAGGTATGCTGAGAAAACTAGTAGTCCCATTGATGATTTACATAAACCTAGTCTAGAGATCAGAGAGAAGATGGTTCTCAATGAAGATGGATCATGCCTCCTTCTGGATGAGTGTCTCTTGTCAAAGGAAGTCACATCTATAGCTCACGTTGATGTCTTGAACAATGTGACTGCCCCAACTCCTAATGGGGATGCTTTGCTGTCTTGGATATTTTCGGGTTCCTCTAGTGGGGATCAATTGACATCGTGGATGCGTATGGAAGAAGATAAAAGACATCAGGGAATGGAAATTGTCCAGATGCTTGAGAAGGAGTTTTATCACTTACAGAGCCTTTGTGAAAAGAAGTGTGAGCGTATAAGTTATGAGGAAGCTCTGCAGGCAGTGGAGGATCTTTGTCTGGAAGAAGGTAAGAAGAGGGAGAATGTGACTGAATTTGTACAGAAAAGCTATGAATCTGTGTTAAGAAAGCGGAGAGAAGAGCTATTTGAGATTGATAATGATGTGATGTATGTTAGCAATAGGTTTGAGTTGGATGCTATATCAAATGTTCTGCAAGAAGCAGAAGCTATGAATGTTAATCAATTTGGCTATGAGGAAACATATGCTGGTGTGACCTCTAAGTTATGTGACTTAGAATCCGGTGAAGATGATGGATGGAGGATGAAGGACTATTTGAATCAAATGGATAGTTGTATAGAAATTGCTATTCAGAAACTGAAAGAACACTTATCTTTAGAGCTTAGCAAAATTGATGCACGAATAATGAGAAATGTTACAGGGATGCAGCAGTTGGAGCTGAAGCTTGAGCCTGTTTCTGCTCATGATTATCGAGCAATAATATTGCCTCTAGTGAAGTCATACCTAAGGGCACTCCTGGAAGATTTGGCTGAAAAAGATGCCAGAGAGAAGTCTGATGCTGCAAGAGAAGCATTTTTGGCTGAGCTTGCTCTAGATTCAAAGAAAGTTGTTAAAGGAGGAAGTGATAATCCAAGACATTTGGAGAAGACAAAAGATAAGAAAAAACATAAAGAGCACAAGAAAACGAGAGATTCAAAGACTACAAATGGTCAAGTGCAGCTCATGCCTTGTGCTACAATTCCTGATTGCTATTCAGTTGCACCTGATAATGATCATCAAGATTCTGAGGTTGTTGTTTCTATCAATGGCAATGACTTGAAACAGCTGGAAGAGGAATTTAGACGTAAAATCGAGCTAGAAGAGGAGGAAAAGAAGCTTGAAGAAACTTTGGAGTTTCAACGGCGGATAGAAAATGAAGCTAAACAGAAGCACCTTGCCGAGCAACAAAAGAAATCCTCTGGGACATATTTAGAAAAAGTGGTGGATGAACTTCAGGATGCTCAATTGAAGGCTGTTGCTGTGGATCTAGATGTACATGAACATATGAAACCACCTATGCAGGAGCAGTTGTCAAAGGAGAATGGATACCAAAGCAATCTGGATGGTGTGCTTAATACCACAGCAAATGGATCCATGGTGCCAATCAATTCTTCAGATGATTCAGGTTCTCATCATCTTCTTCATTCTCCAGCAGATCTTCCTAACAGAGGAGTTCCACAGAATGGTCTTCAGTTGCTTGATCGGCGTACTGGAAAGAAGGGTAAACGACATAAGAATTCTTCGAGATTGGTTAATGGACAGTTTGAAGCTGTCTCATTGGAAAAAGAGAATATTGAGGGTACACATACTGACAGTTGCTTAAGAGAGCAGGTTCAATTGCAGCACAATCAAGATGTTAACAATGTGTTGGGAGATAATGGACCAAAGAGGCTGAAAGATTTGCATATGGAAGATGATGAGGAGGAAAGATTTCAAGCTGATCTTAAAATAGCTGTACGCCAAAGTCTTGACACATATCAAGAACATCAAAAATATCCCTTGGTTTCAAGTTTGAAAACGCTGCAGAGAGTTTCTTCACAAGTAGATAATTCGGGTGTTCCACTGGATGAAGACACAACTGAGATTGAGAATGGAGCTAATCTGCTTGGTACTGGTCTGAAGAATGAAGTGGGTGAATATAATTGCTTTCTCAATGTTATTATACAGGAATTTCTTGGCAGATCAAGATCAGAGCATGATCATGTGGGTAATCCTTGTGTTGTCTGTGCATTGTATGAAATCTTTACTGCCATGGACGCTGCATCAAAGGATTCCAGGAGAGAAGCAGTAGCACCTGCTTCTCTGCGGATTGCTCTAAGCAACCTATATCCAGATAGTAACTTTTTCCAGGAGGCTCAGATGAATGATGCTTCCGAAGTGCTGGAAGTGATTTTTGACTGTCTTCATCAATCATTTACTCACGGTTCCAGTATTTCTTATACGAAATCAACGGAAAGCAACTGTTTGGGATCTTGGGATTGTTCAAATAATAATTGTATAGCACATTCACTCTTTGGAATGAACATTTTTGAGCGAATGAATTGCTACCACTGTGGTCTTGAGTCTCGACATATGAGATATACTTCCTTCTTTCACAATATAAATGCTAATGCCCTCCGGACAATGAAGGTTATGTGTGCTGAAAGCTCCTTCGATGAGATCTTAAATCTTGTGGAGATGAATCATCAGTTGGCTTGTGATCTGGAAGCTGGTGGCTGTGGCAAGCTCAACTACATACATCACTTTCTTTCAACTCCACCCAATGTTTTTATGACAGTTCTAGGTTGGCAAAATACATGTGAGAGTGCTGATGATATAACAGCGACTCTGGCTGCCCTGACTACTGAGATAGATATCAGTATTCTTTATCGTGGTTTAGATCCAAAAAGCACCCATAGCTTGGTTTCAGTGGTTTGCTACTATGGGCAGCATTATCACTGCTTTGCCTATAGCCATGACCATGAACAATGGGTTATGTATGATGATAAGACAGTTAAGGTAATTGGTGGATGGGCTGAGGTTCTGACAATGTGTGAAAGAGGGCATCTTCAGCCTCAGATCACTGCTATTTACCCAGAATGGTTTAGGCAAATAAGCTTGCTAGTTTTAGAGATGTCACAACAAGTGTTGCAAAGGATGAGACAGGCACTATCCCATGAATTCAAAGCAATATGGCAAAACCACGTTGCACTAAAAGAGGGCACAAACCAACTCCATACATTTCGCCTCTCTCTTCCATCTGCTCTTTTACTTAGTCTTTCCATACCCATCAATTCCGCATATTCACATCAAAATGCAGCCCATCTCAGTTCTAAAAATTCCCTCTTCAATTTCTTCCTCTTACTCAGTTTGTCTTTCTGGGGATTATTTTGTCACTGGGGATTCAACATTTTGGCTAATAAAGGTGGTGGAATTATGACCCTTAAGGGTGGCACCACCCAGGCCTGTGCAGCATGCAAATACCAGCGAAGAAAGTGCACTTCCGAATGTCTTCTTGCCCCGTACTTCCCCGCAGACCAACCCAAGGTGTTTCAGAATGTGCATAAATTATTTGGAGTGAGCAACATCATAAAGATCCTAAAGAACTTGGAGCCTAATCAGAAGAAGATAGCCATGGACTCTATCATTTGCCATGCAAATATTAGGGACAAGTACCCTGTCCATGGCTGTTGGGAGGAAATTTGTAGGCTTCGTTACCAAATATGGCAGGTGGAAGAAGAGCTTCGTGCTGTTCATCAACAGCTCGAAATGTGCAGGCAACATCACCAGCATCTTTTTCATGCCTCGCCAATGCCCGATGATGTGACTTCTCAATTAGAATTAGGCATGACACCACCATGTACGAATGCCCTGCAACTCTTCAATCATAATCCTCACCCACATGATTACAGTACAATGGCTGCATTGCCTCTTTCCCAGCAACATTCTTACTCCAACAGTAACAATGAGGCTAATTACAACTCTCTTTACGCGGATTCCAAGGATAATGTCACAAATCATTTGTGCGTTCAGCATCCATATGCAAATAACAATAACAATTCCACGGCAAAGCAATCTCAGCTGGTTGCTTCACAGCTGCAACTACCCATCCAAGAAGACGCTGTTGAAGATTATAACGAGATTCATCCATTTTTTGATACAATTGATGATAGACAATCATATATTTATTCCAAAGAGGCTTATGAGTCAAGTTCAGAAGGATCACTGAAAGATACCAGAAAGTGCATTGAGTATCTCGCGGAGCATGAATTGAAGAGTGCTGCTTCTTGCTTCAGCCTTACCAGCGTCAACTGA | 6078 | 0.4204 | MGHKKRNSPRSKQSAAAASPVAQSAIGGAANGPTSAETNLSKNSNNTPENPTKVELSPPSEGSAYSTIKLECERALNAIRRGNHTKALRLMKESCSRYDNSVYSALIHRVQGTVCVKVASIIDDPSAKQRHLKNAIESARKAVGLSPNSIEFAHFYANLLYEAASDGKEYEEVVQECERALSIVNPADPAKECLQDESQQKLSTAEARIAHVQNELRQLIQKSNIASLSTWMKTLGNGEDKFRLIPLRRGTEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPKSQNEGDRDDRTLDSSLGSGQRIVDRRKYGHMRKNGSTAERRDWVRSYWNSMSIDMKRDLLRVRVHDLKSHFGSSKDTLLNDVLSEAFSYAEANKTWKFWLCFHCNDKYTDSESHMQHVQEHMGNLLPKMQRLLPQNVDNEWIEMILNCSWRPLDVSAAVKMLENQTKCKDSVFLEGHHTEKYGGCFKDASDSYPEENKLGHGLVNYTAESSNYCQLAENDIREGLQVRECTAYPVADSWPISDDSERAKILEKIHSAFEMLIRHKYLAASHLNKVIQFTMDEIQGLAAGSQLLNHGVDQTATCICFLGASQLRKILKFLQELSNACGLGRYAEKTSSPIDDLHKPSLEIREKMVLNEDGSCLLLDECLLSKEVTSIAHVDVLNNVTAPTPNGDALLSWIFSGSSSGDQLTSWMRMEEDKRHQGMEIVQMLEKEFYHLQSLCEKKCERISYEEALQAVEDLCLEEGKKRENVTEFVQKSYESVLRKRREELFEIDNDVMYVSNRFELDAISNVLQEAEAMNVNQFGYEETYAGVTSKLCDLESGEDDGWRMKDYLNQMDSCIEIAIQKLKEHLSLELSKIDARIMRNVTGMQQLELKLEPVSAHDYRAIILPLVKSYLRALLEDLAEKDAREKSDAAREAFLAELALDSKKVVKGGSDNPRHLEKTKDKKKHKEHKKTRDSKTTNGQVQLMPCATIPDCYSVAPDNDHQDSEVVVSINGNDLKQLEEEFRRKIELEEEEKKLEETLEFQRRIENEAKQKHLAEQQKKSSGTYLEKVVDELQDAQLKAVAVDLDVHEHMKPPMQEQLSKENGYQSNLDGVLNTTANGSMVPINSSDDSGSHHLLHSPADLPNRGVPQNGLQLLDRRTGKKGKRHKNSSRLVNGQFEAVSLEKENIEGTHTDSCLREQVQLQHNQDVNNVLGDNGPKRLKDLHMEDDEEERFQADLKIAVRQSLDTYQEHQKYPLVSSLKTLQRVSSQVDNSGVPLDEDTTEIENGANLLGTGLKNEVGEYNCFLNVIIQEFLGRSRSEHDHVGNPCVVCALYEIFTAMDAASKDSRREAVAPASLRIALSNLYPDSNFFQEAQMNDASEVLEVIFDCLHQSFTHGSSISYTKSTESNCLGSWDCSNNNCIAHSLFGMNIFERMNCYHCGLESRHMRYTSFFHNINANALRTMKVMCAESSFDEILNLVEMNHQLACDLEAGGCGKLNYIHHFLSTPPNVFMTVLGWQNTCESADDITATLAALTTEIDISILYRGLDPKSTHSLVSVVCYYGQHYHCFAYSHDHEQWVMYDDKTVKVIGGWAEVLTMCERGHLQPQITAIYPEWFRQISLLVLEMSQQVLQRMRQALSHEFKAIWQNHVALKEGTNQLHTFRLSLPSALLLSLSIPINSAYSHQNAAHLSSKNSLFNFFLLLSLSFWGLFCHWGFNILANKGGGIMTLKGGTTQACAACKYQRRKCTSECLLAPYFPADQPKVFQNVHKLFGVSNIIKILKNLEPNQKKIAMDSIICHANIRDKYPVHGCWEEICRLRYQIWQVEEELRAVHQQLEMCRQHHQHLFHASPMPDDVTSQLELGMTPPCTNALQLFNHNPHPHDYSTMAALPLSQQHSYSNSNNEANYNSLYADSKDNVTNHLCVQHPYANNNNNSTAKQSQLVASQLQLPIQEDAVEDYNEIHPFFDTIDDRQSYIYSKEAYESSSEGSLKDTRKCIEYLAEHELKSAASCFSLTSVN | 2025 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi02g0785 | 2025 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 401 | 421 | IPR013087 | - | |
| Glsi02g0785 | 2025 | Gene3D | Tetratricopeptide repeat domain | 45 | 221 | IPR011990 | GO:0005515 | |
| Glsi02g0785 | 2025 | Pfam | Ubiquitin carboxyl-terminal hydrolase | 1322 | 1597 | IPR001394 | GO:0004843|GO:0016579 | |
| Glsi02g0785 | 2025 | Coils | Coil | 1018 | 1058 | - | - | |
| Glsi02g0785 | 2025 | Gene3D | Cysteine proteinases | 1286 | 1617 | - | - | |
| Glsi02g0785 | 2025 | MobiDBLite | consensus disorder prediction | 300 | 314 | - | - | |
| Glsi02g0785 | 2025 | Pfam | Lateral organ boundaries (LOB) domain | 1743 | 1840 | IPR004883 | - | |
| Glsi02g0785 | 2025 | CDD | Peptidase_C19 | 1380 | 1596 | - | - | |
| Glsi02g0785 | 2025 | MobiDBLite | consensus disorder prediction | 291 | 316 | - | - | |
| Glsi02g0785 | 2025 | Coils | Coil | 195 | 222 | - | - | |
| Glsi02g0785 | 2025 | MobiDBLite | consensus disorder prediction | 28 | 62 | - | - | |
| Glsi02g0785 | 2025 | ProSiteProfiles | LOB domain profile. | 1742 | 1843 | IPR004883 | - | |
| Glsi02g0785 | 2025 | Pfam | Protein of unknown function (DUF629) | 344 | 863 | IPR006865 | - | |
| Glsi02g0785 | 2025 | Pfam | Protein of unknown function (DUF627) | 74 | 184 | IPR006866 | - | |
| Glsi02g0785 | 2025 | ProSiteProfiles | Ubiquitin specific protease (USP) domain profile. | 1299 | 1626 | IPR028889 | - | |
| Glsi02g0785 | 2025 | MobiDBLite | consensus disorder prediction | 952 | 986 | - | - | |
| Glsi02g0785 | 2025 | SUPERFAMILY | Cysteine proteinases | 1299 | 1603 | IPR038765 | - | |
| Glsi02g0785 | 2025 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
| Glsi02g0785 | 2025 | PANTHER | UBIQUITIN SPECIFIC PROTEINASE | 1 | 1616 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi02g0785 | Glsi-ChrGlsi02 | 5083959 | 5096933 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi02g0785 | 68 | 1615 | C2H2 Transcription Factor Family | AT3G47890 | 58.879 | 0.0 | 1744 |
Transcription factors information