Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0767 ATGTCTCGCACGCTCTCCGCCATCTCCACCGACGGTGATGGCTACCCCGCCGGCGCCGGCGAGATCATGCTGTTCGGAGTTAGAGTCGTGGTCGATTCCATGAGGAAGAGTGTGAGTATGAATAATCTATCACAGTACGAGCATCCTCAGGGCGGTTCAAACAACAATAAAGAATATGTTCTCGCCGGCGGTTACGCCTCCGCAGACGAGGCTGTTGCTCATAATTCCGGCAGGCACCGCGAGCGTGAGCGCAAACGAGGGGTTCCATGGACGGAGGAAGAGCACAAACTGTTCTTGCTGGGGTTGCAGAAGGTAGGAAAAGGTGATTGGAGAGGAATCTCAAGGAACTATGTGAAAACAAGGACGCCAACACAGGTTGCCAGCCATGCTCAGAAGTACTTCCTCCGCAAAAGCAACCTTAATCGTCGACGTCGTAGATCCAGCCTATTTGACATTACCACCGACACTGTCTCGGCAATTCCAATGGAAGAACAGATCCAGCATCAAGATGATAGTCCTCAATCACATCCTGTGCACCCTGCAACCGCTGAAACTAGCAACATTAATGGATTTTCAATGATGCCCGTATATCCAATGGGTAATGCCGAATTCAAGGGGTCAACAGAGCTTGTCCGTCCAATTCCTGTTGTTCCAGATCCCAAAGCTTCTGCTGTGTCTGATATCAACTTTAGTTCAAGCTCAGCCATCGATCCACCAACACTCTCTCTCGGGCTATCCTTGTCGTGTGATCAGAGAAATACATCATCAAGGCATAGGGGTCTACATCCAATGCCGCGTTTCTTAGACAATGAAGATAGCATCATAAGTGTTGCTTGA 837 0.497 MSRTLSAISTDGDGYPAGAGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPQGGSNNNKEYVLAGGYASADEAVAHNSGRHRERERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRKSNLNRRRRRSSLFDITTDTVSAIPMEEQIQHQDDSPQSHPVHPATAETSNINGFSMMPVYPMGNAEFKGSTELVRPIPVVPDPKASAVSDINFSSSSAIDPPTLSLGLSLSCDQRNTSSRHRGLHPMPRFLDNEDSIISVA 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0767 278 ProSiteProfiles Myb-like domain profile. 82 134 IPR001005 -
Glsi02g0767 278 CDD SANT 89 134 IPR001005 -
Glsi02g0767 278 Pfam Myb-like DNA-binding domain 89 134 IPR001005 -
Glsi02g0767 278 SMART sant 86 136 IPR001005 -
Glsi02g0767 278 NCBIfam myb-like DNA-binding domain, SHAQKYF class 85 137 IPR006447 GO:0003677
Glsi02g0767 278 ProSiteProfiles SANT domain profile. 85 138 IPR017884 -
Glsi02g0767 278 SUPERFAMILY Homeodomain-like 84 139 IPR009057 -
Glsi02g0767 278 FunFam transcription factor MYB1R1 88 139 - -
Glsi02g0767 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 138 IPR017930 -
Glsi02g0767 278 PANTHER TRANSCRIPTION FACTOR KUA1 21 212 - -
Glsi02g0767 278 Gene3D - 88 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0767 Glsi-ChrGlsi02 4978122 4979680 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi02g0767 Myb_DNA-binding 1.4e-11 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0767 02 4978122 4979680 Glsi13g1225 13 29686209 29687890 CCT