Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0750 ATGGCAATCCCAATTCCCAGTCGCCACTTATTCATAGATGGCGAGTGGAAAGAGCCGATCCTCAAGAAACGAATTCCTATTATCAATCCCTCCACTGAACAGAAAATTGGGGATATTCCAGCTGCTACTGCGGAAGATGTGGAGGTTGCAGTGGCTGCTGCCCGGAGAGCCCTGGTCCTGGACAAGGGGAAACATTGGGCATCCGCTTCTGGATCTGTTCGTGCTCGGTACTTGCGAGCTATCGCTGCTAAGATAACAGAGAGAAAGTCGGAACTAGCAAAACTTGAAGCAATTGATTGTGGAAAACCTCTGGATGAAGCATCATGGGACATGGACGATGTTGCTGGTTGCTTTGATTACTATGCTGACCTTGCTGAAGGATTGGATGCAAAGCAAAAGGCTCCAGTATCTCTTCCCATGGAGACCTTCAAGAGTCATGTTCTTAAGGAGCCCATTGGAGTTGTTGCATTAATTACTCCGTGGAACTATCCTCTGTTAATGGCTGTATGGAAAGTTGCTCCTGCTTTGGCTGCTGGTTGTACTGCAATTTTGAAGCCATCAGAATTGGCATCTGTGACCTGTTTGGAGCTGGGTCAAGTATGTAGAGAAGTGGGCCTTCCTCCAGGTGTCTTAAATATTCTAACTGGATTAGGCCCGGAAGCTGGTGCTCCTTTGGCATCACATCCTCATGTAGACAAGATTGCCTTTACTGGAAGCTCTGTGACTGGGAGCAAGGTTATGACAGCTGCAGCTCAACTGGTCAAGCCCGTTTCACTAGAGCTTGGTGGAAAAAGCCCTATTGTCGTTTTTGAGGATGTTGACCTTGATAAAGCTGCTGAATGGACCATCTTTGGCTGCTTCTGGACTAATGGTCAGATTTGCAGTGCAACATCCCGTCTTATTGTGCATGAAAATATAGCCGGAGAATTTTCTAACAGGCTTGTGAAATGGATCAAAAACATCAAAATTTCTGATCCCTTGGAAGAAGGTTGCAGGCTAGGACCAGTTGTTAGCAAAGGACAGTATGAAAAAATATCGAAGTTCATCTCAACTGCTAAGAGTGAGGGTGCAACTATTTTAACTGGCGGATCTCGACCAGAGCATTTAAAGAAGGGCTTCTTTGTTGAACCAACCATCATAACTGACGTGACTACCTCTATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTTCTCTGTGTAAAAACATTTAGTACTGAGGAAGAAGCTATTGAGCTAGCAAATGACACCCCATATGGCTTAGGTGCTGCTGTAATATCAAATGATCTAGAAAGATGTGAGCGCGTGACTAAGGCTTTTCAGGCTGGAATTGTATGGGTCAATTGCTCTCAACCATGCTTCACTCAAGCCCCCTGGGGAGGCACTAAACGTAGTGGTTTTGGTCGTGAATTAGGAGAATGGGGGCTTGAAAACTACTTGAGTGTGAAGCAAGTGACTCAATATATATCTGATGAACCGTGGGGCTGGTACCAGTCTCCTTCAAAGCTGTGA 1512 0.455 MAIPIPSRHLFIDGEWKEPILKKRIPIINPSTEQKIGDIPAATAEDVEVAVAAARRALVLDKGKHWASASGSVRARYLRAIAAKITERKSELAKLEAIDCGKPLDEASWDMDDVAGCFDYYADLAEGLDAKQKAPVSLPMETFKSHVLKEPIGVVALITPWNYPLLMAVWKVAPALAAGCTAILKPSELASVTCLELGQVCREVGLPPGVLNILTGLGPEAGAPLASHPHVDKIAFTGSSVTGSKVMTAAAQLVKPVSLELGGKSPIVVFEDVDLDKAAEWTIFGCFWTNGQICSATSRLIVHENIAGEFSNRLVKWIKNIKISDPLEEGCRLGPVVSKGQYEKISKFISTAKSEGATILTGGSRPEHLKKGFFVEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEEEAIELANDTPYGLGAAVISNDLERCERVTKAFQAGIVWVNCSQPCFTQAPWGGTKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYQSPSKL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0750 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Glsi02g0750 503 Pfam Aldehyde dehydrogenase family 23 485 IPR015590 GO:0016491
Glsi02g0750 503 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Glsi02g0750 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Glsi02g0750 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Glsi02g0750 503 CDD ALDH_F10_BADH 27 487 - -
Glsi02g0750 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
Glsi02g0750 503 SUPERFAMILY ALDH-like 5 489 IPR016161 GO:0016491
Glsi02g0750 503 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 277 - -
Glsi02g0750 503 PANTHER ALDEHYDE DEHYDROGENASE 4 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0750 Glsi-ChrGlsi02 4894460 4903520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0750 1 501 Aldehyde Dehydrogenase Gene Family AT1G74920 83.034 0.0 877
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0750 02 4894460 4903520 Glsi02g0750 02 4894460 4903520 ECH