Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0731 ATGCATGGGCGTGGAGGTGAGGAGAGGAAAAGAACTCGGCACATGTGGACAACCCCCACACGTGGTCACCCGATTGTAAGCGCTGCTCCCGATGTTTCTTCTTCTTCATCATCGTCTTCAGCTAATTCGTTCTGTAAGGACGGTCGTAAAATAAGTGTTGGTGACTGTGCTCTCTTCAAACCACCTCAAGAGTGCCCACCTTTTATTGGAATAATTCGATTGCTGACAGTTGGTAAAGAAGGTAAATTGAAGTTAGTTGTTAATTGGCTTTATCGATCTGCTGAAGTGAACCTTGGCAAAGGTGTCCTATTGGAGGCTGCGCCAAACGAAATTTTCTACTCCTTTCATAAGGATGAGATTCCTGCTGCATCACTGCTTCATCCTTGTAAAGTTGCATTTCTTCCTAAAGGTGTTGAACTTCCATCAGGGATTTCGTCATTTGTGTGTAGGAGGGTTTATGACATTGCAAACAAGTGTTTATGGTGGTTAACTGACCAAAACTATATTAATAAACATCAAGAAGAAGTAGATAAGCTATTATACAGGACTCGCATAGACATGCATGCAACAGTGCAATCAGGTGGTCGATCTCCCAAGCCAATGAGTAGTCCAACATCATCACAGTTAAAATCAGGTTCAGACAGTGTCCAGAACAGTGCTTCTTCTTTTCCTTCTCAAGTTAAGGGTAGGAAAAGAGAGAGGGTAGATCAAGGGTCTGAGCCTGTGAAGCGAGAACGTGCAACAAAAATTGAGGATGGAGATTCTGGTCATTCTAGACAGGAGAGCATTTTAAAGACAGAGATTGCCAAAATTACAGAAAAGGGAGGGCTTGTTGATACTGACGGGGTTGAGAAACTAGTGCACCTCATGGTTCCTGATAGGAATGTGAAAAAGATAGATTTGGCTAGCCGGTCAATGCTTGCAGCTGTAATTGCAGCAACAGAGAAGTTTGATTGTCTTAGTCAGTTTGTGCAGCTGAAGGGTTTGCCTGTATTTGATGAATGGCTCCAAGAGGTCCATAAAGGGAAGATTGGCGATGTTAGTGGGTCTAGGGATGGTGATAGATCTGTTGAGGAATTTCTCTTGGTATTACTTCGGGCACTTGATAAGCTTCCTGTAAATCTTCAGGCTCTACAAACGTGTAACATTGGTAAATCTGTGAATCATTTGCGAACTCACAAAAACTCGGAAATCCAGAAGAAAGCAAGGGGATTAGTTGACACCTGGAAGAAACGCGTTGAAGCTGAAATGAATATAAATGATGCAAAATCTGGTTCAGGTACTGTCCCCTGGCACACTCGAACACGCCTTTCGGAAGTTTCTCAAGGTGGGAACAGAAATTCAGGTGGGTCATCTGATGTTGCCATGAAGAGCTCTGTTACACAGCTTTCTGCATCCAAAACTGCCTCTATGAAGATTGCCCAGGGAGAGAATATGACCAGATCTGCATCACCAGGATCTATGAAATCAGTGCCCTCACCTGCCTCTGCAACGATTAACGTAAAAGATGGACAACCCCGTGGTGTTAGTGGAGTTTCTGATCTCCCCTTGGCAAATGCAAGGGATGAGAAAAGTAGTAGTTCTAGTCCATCTCATAATAACAGCCAATCTTGTTCTAGTGACCATGCTAAAACTGGGGGGTTTTCAGGAAAGGAGGATGCTAGGAGCTCTACTGCTATGAGTGTGAATAAGGTATCGGGTGGTTCTTCAAGGCACCGAAAGTCTATTAATGGAATCCCTGGTTCAACTCCATCTGGAGTTCAAAGAGAGACAGGACGAAATTCCACCTTGCATAAAAATTCAACTTCTGAAAAATTATCACAATCTGGATTAACAGAAAAGGCACTTGATGGGACTTCTGTTGAGGGAAGTATTCCCAAACTGATTGTTAAGATTCCAAACCGAGGTCGAAGTCCTGCAGAAAGTGCCAGTGGAGGTTCTTTTGATGAGCCAATCATGAACAGTCGAGCTTCATCTCCTGTCCTTTCAGAGAAGAATGATCAGTTAGATCATAGCTCGAAGGAAAAGATTGATTTTTATCGAGCTCATATAGGCTCAGATATTAATACTGAGTCTTGGCAGAGTAATGATTTTAAAGATGTACTGACAGGGTCTGATGAAGGCGATGGATCACCTGCGGCTGTTACTGATGAAGAGCGCTATAGGACTGTTGATGACTCTAAGAAAATGTTGGAAGCATCAAAAGATACTTCCTCATCACCTGGAAATGAAAATAAAGAAGCTAATGTGCAGGATGCTTCTTTGACTTCCATAAATGCATTAATTGAAAGTTGTGTCAAGTATTCTGAAGCTAATGTTTCATTGTCAGCTGTTGATGATGTTGGAATGAATCTGCTTGCTAGTGTGGCAGCTGGAGAGATTTCCAAGTCTGAATTGGTAACACCAGCAGGATCCCCGGAAGGAAACATCACTACAGTTGAACAGTCATGTGCAGGCAGTGCCGTAGTCAAGTCCTCTGAAGGGAAACTCGTTCAATATGAGTGTCACTTGAATGATGGTACTGATGAATATAAGAAGGATAATATATCTGGTGATTTGGGTGCAAATAATGATGATAAAAATTCTGGTCTTTTGGCATCTGAAGTGAAAGTTGCTGGAGAGCATAATAAGCATATTACTCCATCTGGTATGGATTTGCAGCGGGTTACTGAAACTTGTTTAGAAAGCAAAGAAAAATTGAGTGAAGTTCCAGTTGCTGCTTCATTGGATGGCTTTCCTGAATGTGCCATGCAAGAAGCCAGAGATAGTGACAGTAGTAAGCAACTCAAGGAGAAAAAGCTTGTTGGAGGTGCTAATGCAGGTGGAAATCTTGATGATGAAGTTAGTGATGTTGCAAGAGAAGTTGAGATGGACAAAATTGATAAATCATTATCACACCCCTCCACAGAAGTTGATGTTAAGGGTGATAATCGTACTACTGAGGGATTAAGCAGTGGTGAACAGACAGCTCAGAATGTTCCTTTAATTGTTATGCAATCCAATTCAGTAAAGGAAACACATGAGAAGGTACCCCAGCCTTCTGGTTATAGTGTCGATAAGGCTTCAGAAGACCATAGTGAAAGAGAATCCAAAAAATCTGATGATGTGGCTTCTCAAAATCCTGCTAGTCAATCTGAAAAGCAAAGAAATGAGTGTAAAAGTGATGCTGTGACAATGCCTGAGAACAGAAGTACAACCATTTTAGGTTCAGGTGTGACTGGTCATGCTGCTGAGCATGTGGAGGAGAATTCAGGAACAAAAGAGATTCATGATCAAAACACTGGACAGATTGTGAACAGAGCTTCACCGAGCTTTCTTTCTCAAGAAATGGAGCAGTGTCTGGGCTCCAAAGGGTCAAAATTGACTGCCATGGAAGCAGAGGAAGCTGAGGAGTGCACGTCTACCACTGCAGACAACTCTTCAATGTCTGCTGCTGTTGTGTCAGATGTGGTTGATGCAAAAGTTGAATTTGATTTAAATGAAGGCTTCAGTGCAGATGATGGAAAATCTGGAGACTTCAATAGCATTGCCATGTCTGGATGTCCACCTGCTGTATTGATCAGTCCTGTGCCATTTCCTGCTTCTACCATGTCTAGTGGTATTCCTGCATCAATCACTGTGGCTGCTGCTGCGAAGGGGCCCTATGTACCACCTGAAGACTTGTTGAAGAGTAAAGGGAAGCTTGGTTGGAAGGGATCAGCTGCCACTAGTGCATTCCGGCCTGCTGAACCCAGGAAAGTCATGGAAATGCCTCTTGGTACACCAACTGCCCCTTTATCTGGTGCTGCAGCTGGAAAGCAGAGTAGACAACTATTGGATATTGACTTGAACGTGCCTGATGAAAGAATACTTGATGATGTTGACTCTCAAACTTGTTCTCGTCAGACAGATTGTGTTTCTCTTGCAGCTAATAGTTGTGATCAAGTATGCAATAAAATAAGAGCTTCACCTGTTCACTGCTCTGGAGGCCTTGGTCTTGACTTGAACCAAGTGGACGAAGCATCTGATTTGGGCAATTGCTCCCTGAGCAATGGCCATAAAATGAATTTACCCCTTCTGCAGGTGATACCATCATCGAGTGGTCATTCAAATAGAGAGGTGAGTGCTCACAGGGACTTTGATTTGAATGATGGACCTGCAGTTGATGAAGTCAACATGGAACCATCATTGTTCACTCAGCATGCCAGAAGCAGTTTGCCATCCCAATTACCTGTTTCTGGGCCTAAAATGAATACTGAACTGGGGAGCTTCTCATCATGGTTTCCTTCCACTGGGAACACCTATTCGGCTGTCACAATATCTTCAATCATGCCTGACAGAGGGGATCAGCCCTTTTCAATTGTCGCACCTAATGGACCACAAAGAATGCTGGGTCCTGCTACTGGTGGCAGCCCATTTGGACCTGATGTTTATAGGGGATCAGTGCTGTCATCTTCTGCAGTGCCATATCCATCTGCACCATATCAATATCCTGTCTTCCCTTTTAATTCCAGCTTTCCTCTTCCATCAGCATCGTTTTCTGGTGGATCAACTACTTATGTAGTCCCTACAGTAAATTCACAGTTAATAGGACCTGCCAGTACAGTTTCATCTCACTACCCTAGGCCTTGTGTCTTCAGCATTCCTGATGGTAGTGGTACTGCAGAGAGTAGTAAGAAATGGAGAGGTCAGGGTTTAGATCTTAATGCTGGGCCTGGAGTTCCAGACATGGAGGGGAGAGATGAAAGTTCAGCTCTTTTGCCAAGGCAACTTTCTGTTGCCAGTTCGCAGGCCCTAGCTGAGGAGCAAGCGAGGATGTTCCAGCTGGCTGGTGGTGTTCTTAAGAGGAAGGAACCTGATGGTGGATGGGATAGCTACAAGCAATCCTCATGGCAATAG 4878 0.4362 MHGRGGEERKRTRHMWTTPTRGHPIVSAAPDVSSSSSSSSANSFCKDGRKISVGDCALFKPPQECPPFIGIIRLLTVGKEGKLKLVVNWLYRSAEVNLGKGVLLEAAPNEIFYSFHKDEIPAASLLHPCKVAFLPKGVELPSGISSFVCRRVYDIANKCLWWLTDQNYINKHQEEVDKLLYRTRIDMHATVQSGGRSPKPMSSPTSSQLKSGSDSVQNSASSFPSQVKGRKRERVDQGSEPVKRERATKIEDGDSGHSRQESILKTEIAKITEKGGLVDTDGVEKLVHLMVPDRNVKKIDLASRSMLAAVIAATEKFDCLSQFVQLKGLPVFDEWLQEVHKGKIGDVSGSRDGDRSVEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNSEIQKKARGLVDTWKKRVEAEMNINDAKSGSGTVPWHTRTRLSEVSQGGNRNSGGSSDVAMKSSVTQLSASKTASMKIAQGENMTRSASPGSMKSVPSPASATINVKDGQPRGVSGVSDLPLANARDEKSSSSSPSHNNSQSCSSDHAKTGGFSGKEDARSSTAMSVNKVSGGSSRHRKSINGIPGSTPSGVQRETGRNSTLHKNSTSEKLSQSGLTEKALDGTSVEGSIPKLIVKIPNRGRSPAESASGGSFDEPIMNSRASSPVLSEKNDQLDHSSKEKIDFYRAHIGSDINTESWQSNDFKDVLTGSDEGDGSPAAVTDEERYRTVDDSKKMLEASKDTSSSPGNENKEANVQDASLTSINALIESCVKYSEANVSLSAVDDVGMNLLASVAAGEISKSELVTPAGSPEGNITTVEQSCAGSAVVKSSEGKLVQYECHLNDGTDEYKKDNISGDLGANNDDKNSGLLASEVKVAGEHNKHITPSGMDLQRVTETCLESKEKLSEVPVAASLDGFPECAMQEARDSDSSKQLKEKKLVGGANAGGNLDDEVSDVAREVEMDKIDKSLSHPSTEVDVKGDNRTTEGLSSGEQTAQNVPLIVMQSNSVKETHEKVPQPSGYSVDKASEDHSERESKKSDDVASQNPASQSEKQRNECKSDAVTMPENRSTTILGSGVTGHAAEHVEENSGTKEIHDQNTGQIVNRASPSFLSQEMEQCLGSKGSKLTAMEAEEAEECTSTTADNSSMSAAVVSDVVDAKVEFDLNEGFSADDGKSGDFNSIAMSGCPPAVLISPVPFPASTMSSGIPASITVAAAAKGPYVPPEDLLKSKGKLGWKGSAATSAFRPAEPRKVMEMPLGTPTAPLSGAAAGKQSRQLLDIDLNVPDERILDDVDSQTCSRQTDCVSLAANSCDQVCNKIRASPVHCSGGLGLDLNQVDEASDLGNCSLSNGHKMNLPLLQVIPSSSGHSNREVSAHRDFDLNDGPAVDEVNMEPSLFTQHARSSLPSQLPVSGPKMNTELGSFSSWFPSTGNTYSAVTISSIMPDRGDQPFSIVAPNGPQRMLGPATGGSPFGPDVYRGSVLSSSAVPYPSAPYQYPVFPFNSSFPLPSASFSGGSTTYVVPTVNSQLIGPASTVSSHYPRPCVFSIPDGSGTAESSKKWRGQGLDLNAGPGVPDMEGRDESSALLPRQLSVASSQALAEEQARMFQLAGGVLKRKEPDGGWDSYKQSSWQ 1625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 227 261 - -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 734 751 - -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 421 500 - -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 1 15 - -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 699 751 - -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 1020 1035 - -
Glsi02g0731 1625 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1625 - -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 632 671 - -
Glsi02g0731 1625 Gene3D - 31 276 IPR043151 -
Glsi02g0731 1625 SMART TFS2_5 336 415 IPR003617 GO:0005634
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 520 544 - -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 959 977 - -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 713 733 - -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 959 1095 - -
Glsi02g0731 1625 ProSiteProfiles TFIIS N-terminal domain profile. 339 416 IPR017923 -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 1 38 - -
Glsi02g0731 1625 Pfam BAH domain 50 157 IPR001025 GO:0003682
Glsi02g0731 1625 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 283 417 IPR035441 -
Glsi02g0731 1625 SMART BAH_4 49 164 IPR001025 GO:0003682
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 190 261 - -
Glsi02g0731 1625 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 318 427 IPR035441 -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 1057 1071 - -
Glsi02g0731 1625 ProSiteProfiles BAH domain profile. 49 164 IPR001025 GO:0003682
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 978 1008 - -
Glsi02g0731 1625 CDD TFIIS_I 338 414 - -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 419 618 - -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 648 666 - -
Glsi02g0731 1625 Pfam TFIIS helical bundle-like domain 364 413 IPR017923 -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 551 615 - -
Glsi02g0731 1625 MobiDBLite consensus disorder prediction 195 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0731 Glsi-ChrGlsi02 4759963 4765878 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Glsi02g0731 BAH 1e-07 No_clan