Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0719 ATGGCAGCACGAAGACTTTGCTCGTTGGTTTTTCGCTCTTCTTCTCCCTTTGCTTCTCTGCTCCTGCCACTAGGAAGAGACGCCGGCAGGTGGAGAAACATCAAGAGGTTGAGCACTGCTGCTGCAGAAGTTGAAGATTTGATCACACCGTCAGTCCAAATAAGATACACCAAGCATCTAATAAATGGGCAATTCGTGGATGCTGCATCAGGAAAAACTTTTCCAACGTACGACCCGCGTACTGGGGAAGCGATAGTTCATGTTGCTGAAGGTGACCAAGAAGATATCAACCGTGCAGTATCTGCAGATCGCAAGGCCTTTGATGAGGGACCATGGCCCAATATGCCCCCTTACGAAAGATCACGGATCTTATTGCGATTTGCTGATTTGGTTGAGAAACACACTGATGAGCTTGCAGCTCTGGAAACATGGAATAACGGGAAGCCTTATGAACAAGCTGCAAACATTGAGTTACCAACGTTTGTACGTCTGCTTCACTACTATGCTGGATGGACAGATAAAATTCATGGTCTGACAGTCCGAGCTGATGGGAACTATCATGCACAAACATTGCATGAACCAATAGGCGTTGCAGGGCAAATTATACCATGGAACTTTCCCCTGTTGTTGTTTGCTTTTAAAGTTGGCCCTGCTCTAGCATGTGGTAATACTGTTGTCCTAAAATCTGCTGAGCAAACACCTTTGACTGCTCTCTTTGCTGCACATCTACTTCATGAGGCTGGTCATCCCCAAGGGGTTCTAAATGTAGTGTCTGGTTATGGTCCAACTGCCGGTTCAGCCCTTGCCAGTCATATGGATGTAGACAAGCTAGCCTTCACTGGATCAAGTGAGACAGGAAAAATTATATACGAATTGGCTGCAAAAAGCAATCTTAAGCCAGTGACATTGGAGCTTGGAGGAAAATCACCCTTCATAGTGTGTGAGGATGCTGATGTTGACAAGGCTGTGCCGCTGTGGAACTTGCACACTTTGCTCTCTTCTTTAATCAGGCAGAAAGCAAAGGCAAGTGCTTTGAAACGCGTTGTTGGTGACCCCTTCAAGAAAGGCGTAGATCAAGGTGCTCAGGTATTGAAAGCAATGGTACTCTGGAATGTGGAGGTGAAAGACTTAGCACCAAAGGCTTTTTTGTGCAGCCAACAGTGTTCTCCAATGTTCAGGGAGATTGATGAAGTAATAAGAAGAGCAAACAGAACGAGGTATGGTCTAGCAGCTGGGGTGTTCACTAAGGATTTAGAGACAGCCAACAGGTTGATGCGAGGACTGAGGGTTGGAACAGTGTGGATTAATTGCTATAATGTGTTTGATGCTGCAATCCCTTTTGGAGGGTACAAAATGAGTGGGATAGGGAGGGAGAAGGGAAATCTACAGCCTTCACAACTATTTGCAGGTCAAGGCTGTGGTTACACCTCTCAAGGATCCTGCATGGCTGTAACTACTCGTCACTTGTCCGGGGCGTGA 1479 0.4638 MAARRLCSLVFRSSSPFASLLLPLGRDAGRWRNIKRLSTAAAEVEDLITPSVQIRYTKHLINGQFVDAASGKTFPTYDPRTGEAIVHVAEGDQEDINRAVSADRKAFDEGPWPNMPPYERSRILLRFADLVEKHTDELAALETWNNGKPYEQAANIELPTFVRLLHYYAGWTDKIHGLTVRADGNYHAQTLHEPIGVAGQIIPWNFPLLLFAFKVGPALACGNTVVLKSAEQTPLTALFAAHLLHEAGHPQGVLNVVSGYGPTAGSALASHMDVDKLAFTGSSETGKIIYELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVPLWNLHTLLSSLIRQKAKASALKRVVGDPFKKGVDQGAQVLKAMVLWNVEVKDLAPKAFLCSQQCSPMFREIDEVIRRANRTRYGLAAGVFTKDLETANRLMRGLRVGTVWINCYNVFDAAIPFGGYKMSGIGREKGNLQPSQLFAGQGCGYTSQGSCMAVTTRHLSGA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0719 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 445 461 IPR016162 GO:0016491
Glsi02g0719 492 Pfam Aldehyde dehydrogenase family 392 460 IPR015590 GO:0016491
Glsi02g0719 492 Pfam Aldehyde dehydrogenase family 65 324 IPR015590 GO:0016491
Glsi02g0719 492 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 42 325 - -
Glsi02g0719 492 SUPERFAMILY ALDH-like 51 462 IPR016161 GO:0016491
Glsi02g0719 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 39 336 IPR016162 GO:0016491
Glsi02g0719 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 392 444 IPR016163 GO:0016620
Glsi02g0719 492 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 61 333 - -
Glsi02g0719 492 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 303 310 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0719 Glsi-ChrGlsi02 4692441 4695896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0719 1 460 Aldehyde Dehydrogenase Gene Family AT3G48000 60.194 0.0 607