Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0716 ATGAAGGAGACCAGTGATGGGTTTGTGAGGGCAGATCAGATTGATCTGAAGAGCATAGACGAACAACTCGAGAGGCACCTCAACAGGGCATTGACTCTGGAGAAGCACAAGAGTAAAGAGGAAGATGTTGCCAGTAATATCAGCGCTACTTCCGTTAAGAGTTTAAGTACTGGTGGTGGACCTACCTTCAAGAGGCAAAGGCAGGAGTGGGAGATTGACCCTTCCAAGCTAATCATCAAGAGTGTTATAGCCCGTGGTACCTTCGGCACGGTCCACCGTGGTGTCTATGATAGCCTAGATGTCGCCGTTAAATTGCTGGATTGGGGTGAAGAAGGCCAGAGGACGGAAGCTGAAATTGCTTCATTAAGGGCAGCGTTTATACAAGAAGTTGCTGTTTGGCATAAACTTGAGCATCCTAATGTCACTAAGTTTATAGGTGCAACAATGGGGTCGGCAGAATTACAGGTACAAACTGAAGATGGTCTAATCAGCATGCCAAGCAATATCTGTTGTGTTGTTGTGGAGTATCTTCCAGGGGGTGCACTAAAATCTTACCTAATAAAAAACAGGAGAAGGAAGTTAGCATTTAAGGTTGTCATCCAGCTGGCACTTGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAAAAGATTGTCCACAGAGATGTAAAGACAGAGAACATGCTATTGGATAAGACGCGTACGGTTAAAATTGCTGATTTTGGGGTTGCACGTGTTGAGGCTTCAAATCCTAATGACATGACTGGGGAGACTGGTACTCTTGGTTACATGGCTCCAGAGGTTTTAAATGGCAACCCCTATAATAGGAAATGTGATGTGTACAGTTTTGGCATCTGTTTGTGGGAGATATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAGGTTACTTCAGCCGTTGTTCGCCAGAACCTGAGACCAGAAATACCAAGATGTTGCCCGGGTTCTCTGGCAAATGTAATGAAGAAATGCTGGGATGCCAATCCTGATAAGAGACCGGAGATGGATGAGGTAGTTTCCATGGTAGAGGCCATTGACACATCAAAAGGTGGAGGTATGATCCCTAGTGATCAGCAGCAGGGTTGTTTTTGCTTCCGCAAGCACAGAGGGCCTTAA 1143 0.4541 MKETSDGFVRADQIDLKSIDEQLERHLNRALTLEKHKSKEEDVASNISATSVKSLSTGGGPTFKRQRQEWEIDPSKLIIKSVIARGTFGTVHRGVYDSLDVAVKLLDWGEEGQRTEAEIASLRAAFIQEVAVWHKLEHPNVTKFIGATMGSAELQVQTEDGLISMPSNICCVVVEYLPGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPGSLANVMKKCWDANPDKRPEMDEVVSMVEAIDTSKGGGMIPSDQQQGCFCFRKHRGP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0716 380 Pfam Protein tyrosine and serine/threonine kinase 79 349 IPR001245 GO:0004672|GO:0006468
Glsi02g0716 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Glsi02g0716 380 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0716 380 FunFam Serine/threonine-protein kinase HT1 177 362 - -
Glsi02g0716 380 Gene3D Transferase(Phosphotransferase) domain 1 177 369 - -
Glsi02g0716 380 Gene3D Phosphorylase Kinase; domain 1 65 160 - -
Glsi02g0716 380 SUPERFAMILY Protein kinase-like (PK-like) 58 351 IPR011009 -
Glsi02g0716 380 CDD STKc_MAP3K-like 83 350 - -
Glsi02g0716 380 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 56 354 - -
Glsi02g0716 380 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0716 380 FunFam Kinase suppressor of Ras 1 66 160 - -
Glsi02g0716 380 PRINTS Tyrosine kinase catalytic domain signature 212 230 IPR001245 GO:0004672|GO:0006468
Glsi02g0716 380 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Glsi02g0716 380 PRINTS Tyrosine kinase catalytic domain signature 174 187 IPR001245 GO:0004672|GO:0006468
Glsi02g0716 380 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0716 Glsi-ChrGlsi02 4679262 4683109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0716 1 312 MAP Kinase Kinase Kinase AT5G50000 83.912 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Glsi02g0716 PK_Tyr_Ser-Thr 2.3e-63 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0716 02 4679262 4683109 Glsi02g0716 02 4679262 4683109 ECH