Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0710 ATGAAGAATTTTAACTGGTTTAAACAACCTCCAAAGAATGGGAGGTCAGGGAGAAGTCTTTCGCTTGGGGAATACAAGCGAGCTATTTCATGGTCCAAATATCTGGTCTCCTCCGGGGCTGCGATTAAGGATGAAGGAGAAGACGAATGGAGAGCTGACATGTCTCAGTTATTGGTTGGGCCCAGAATTGCTACTGGCAACCATAGCCGGGTCTACAGAGGCCTTTACAAGCAGAGGCATGTGGCAATTAAGATTATAAGTCAACCAGAGGAGGACGAGGACTTGGCTGCTGTGCTTGAGAAGCAGTTTAATTCAGAGGTTTCCTTGCTTTTTGGATTGCACCATCCAAATATCGTTACGTTTGTTGCTGCTTGCAAGAAACCTCCTGTATTTTGTGTAATAACTGAATATTTAGCTGGGGGATCATTGAGAAAATACCTGCGTGCGCAAAACCCATATTCAGCCCCACTCAAACTTGTTCTGAAATTAGCCTTAGACATTGCACGGGGTATGCAATATCTTCATTCTCAGGGGATAATTCATAGGGATCTCAAATCAGATAATCTGCTGTTGGGAAAAGATATGTGTGTAAAAATAGCAGACTTTGGAATCTCATGCTCCGAATCTGATTGCATCATTTGGAGAGATACTGGAACTTATCGTTGGATGGGGCCTGAAGTGATGAAAGCAAACATTCATACCAAGAAATCAGATGTCTACAGTTTTGGCGTAGTTCTTTGGGAGCTTTTAACAGGATTGGTACCATTTGCAAACATGACACCAGAGCAGGCAGCATATGCAGCCTACTACAAGAATGAAAGGCCACCGTTGCCACCTGAATGTCCATTGGCATTTAGTCATCTGATCAACAGATGCTGGTCAAGAAGTCCATATAAAAGGCCACATTTTGATGAGATAGTTTCCATTTTGGAGAGTTATGCGGAATCCCAGAAGGAGGATCCAGAATTTTTCTCTACTTTCGTTCCCCCACGTGATAATGTTATTTTGGGATGCTTACCGAAGTGTATTGTTGGCAGTATATCTGCTACTTGCTAA 1056 0.429 MKNFNWFKQPPKNGRSGRSLSLGEYKRAISWSKYLVSSGAAIKDEGEDEWRADMSQLLVGPRIATGNHSRVYRGLYKQRHVAIKIISQPEEDEDLAAVLEKQFNSEVSLLFGLHHPNIVTFVAACKKPPVFCVITEYLAGGSLRKYLRAQNPYSAPLKLVLKLALDIARGMQYLHSQGIIHRDLKSDNLLLGKDMCVKIADFGISCSESDCIIWRDTGTYRWMGPEVMKANIHTKKSDVYSFGVVLWELLTGLVPFANMTPEQAAYAAYYKNERPPLPPECPLAFSHLINRCWSRSPYKRPHFDEIVSILESYAESQKEDPEFFSTFVPPRDNVILGCLPKCIVGSISATC 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0710 351 PRINTS Tyrosine kinase catalytic domain signature 237 259 IPR001245 GO:0004672|GO:0006468
Glsi02g0710 351 PRINTS Tyrosine kinase catalytic domain signature 218 228 IPR001245 GO:0004672|GO:0006468
Glsi02g0710 351 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Glsi02g0710 351 PRINTS Tyrosine kinase catalytic domain signature 281 303 IPR001245 GO:0004672|GO:0006468
Glsi02g0710 351 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Glsi02g0710 351 Pfam Protein tyrosine and serine/threonine kinase 61 310 IPR001245 GO:0004672|GO:0006468
Glsi02g0710 351 ProSiteProfiles Protein kinase domain profile. 57 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0710 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Glsi02g0710 351 Gene3D Transferase(Phosphotransferase) domain 1 140 327 - -
Glsi02g0710 351 SMART serkin_6 57 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0710 351 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Glsi02g0710 351 Gene3D Phosphorylase Kinase; domain 1 47 138 - -
Glsi02g0710 351 CDD STKc_MAP3K-like 63 310 - -
Glsi02g0710 351 SUPERFAMILY Protein kinase-like (PK-like) 45 310 IPR011009 -
Glsi02g0710 351 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 50 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0710 Glsi-ChrGlsi02 4645706 4647801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0710 30 319 MAP Kinase Kinase Kinase AT1G62400 58.644 1.50e-122 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Glsi02g0710 PK_Tyr_Ser-Thr 4e-64 CL0016