Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0696 ATGTTTCAAATCATAATTAATGCATTCCAACTCTCTACTATAAGGGCCGCAAAGGAGATTGCTTCAAACACTAAGCTATTTCCCTCATTTTCTGTTACATTTTATGTCATGGATCTTGAGACAAAGCTCAGAGAAAACTATGTCTCACACCCAATGCAACCGCAAGAAATCCACTTGAAATCCAACATGAAAGATCATGAGCTTCCTTTTGGGGTTCCTTCATCACAGGGTTTCTTGCAAGATTTACTCCATATTGATCCGTTTCATGTAAATGGGTCTTCATCAAATCCCTTTTTCTGGGTCCAAAAACCTTTTGATAATTTTACTTATGAGTATTCACCAGCAGATTATGATGCTCACGAGTACAAACCTTTCGTTGAAAATAATGGCTGTGTTAGGCATGCCCATGCTATGGACAATTTCCAGTATGGAGGCTACAGCCTCAACCTCTCAGAGAGAAATCAGTTGGAAATGATGGCTGCAAGCCAAAGTTATGTGCCCTTTGATTATCAAGAAACAATGCCCATGAATTTTATTGTAGCTGATGAAGTCTCATGCATATCTCCAGATAACTATTACGCAAGAGTTGGCAAGAATAAAGTGAATAAGGCATCATCTCGCAAAGTTAGGAACAAGTCCAACGTAGTAAAGGGACAGTGGACGATAGAAGAAGATAGGTTGCTGATTCAACTGGTTGAACAATATGGGGTGAGGAAGTGGTCTCATATTGCTCAGATGTTGCCTGGCAGAATAGGCAAACAGTGTAGAGAACGATGGCATAACCATCTAAGGCCTGACATTAAGAAGGATACATGGACTAATGAAGAGGATACGATACTGATCGAAGCCCATGTAGAGATAGGGAACAAATGGGCAGAGATTGCTAAAAGATTGCCTGGGAGAACTGAAAATTCCATAAAAAACCATTGGAACGCAACCAAGAGAAGGCAATATTCCAAAAGAAAGTGTCGCTCAAAGTACCCAAGAGGCTCTCTTCTGCAAGATTACATCAAGAGCTTGAACTTAGACCAAAACCCACCAAAAGACTATCGCAAAAGATCATCTTCTGCAGCTAACACTAATAATAATGCTATGACTAGCACGAAGAAAGCCTCAACTCAGCCTCATTCTGCAGAAGATCAGTTTTGTCCCAACAATGACCGATTGGTATCCATTTATGATTTTAACGAGGTCCCAGATTTTTGTTTCGATGAGAATTTGTTTCAGGAGCGGTGCAGTATTGATTCTCTACTTGATGAAGATTTTGGAGGAAAAACGCTATGTGCTTCTGTTTTTAATGTTAATGGGCATCATTTTGAGTCAGAGATGGGACCAATGGTGGGGGTTGAAGTTAAGAAGGAGATGGATTTGGTGGAGATGATGTCTCAGGTCAATGAAGTTTCATTATGA 1410 0.4014 MFQIIINAFQLSTIRAAKEIASNTKLFPSFSVTFYVMDLETKLRENYVSHPMQPQEIHLKSNMKDHELPFGVPSSQGFLQDLLHIDPFHVNGSSSNPFFWVQKPFDNFTYEYSPADYDAHEYKPFVENNGCVRHAHAMDNFQYGGYSLNLSERNQLEMMAASQSYVPFDYQETMPMNFIVADEVSCISPDNYYARVGKNKVNKASSRKVRNKSNVVKGQWTIEEDRLLIQLVEQYGVRKWSHIAQMLPGRIGKQCRERWHNHLRPDIKKDTWTNEEDTILIEAHVEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRGSLLQDYIKSLNLDQNPPKDYRKRSSSAANTNNNAMTSTKKASTQPHSAEDQFCPNNDRLVSIYDFNEVPDFCFDENLFQERCSIDSLLDEDFGGKTLCASVFNVNGHHFESEMGPMVGVEVKKEMDLVEMMSQVNEVSL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0696 469 PANTHER MYB PROTEIN-RELATED 194 367 - -
Glsi02g0696 469 Pfam Myb-like DNA-binding domain 220 277 - -
Glsi02g0696 469 CDD SANT 271 314 IPR001005 -
Glsi02g0696 469 FunFam Transcription factor MYB119 270 334 - -
Glsi02g0696 469 MobiDBLite consensus disorder prediction 351 379 - -
Glsi02g0696 469 FunFam Transcriptional activator Myb isoform A 216 269 - -
Glsi02g0696 469 SUPERFAMILY Homeodomain-like 214 310 IPR009057 -
Glsi02g0696 469 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 268 318 IPR017930 -
Glsi02g0696 469 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 267 IPR017930 -
Glsi02g0696 469 CDD SANT 220 263 IPR001005 -
Glsi02g0696 469 ProSiteProfiles Myb-like domain profile. 264 314 IPR001005 -
Glsi02g0696 469 SMART sant 268 316 IPR001005 -
Glsi02g0696 469 SMART sant 216 265 IPR001005 -
Glsi02g0696 469 MobiDBLite consensus disorder prediction 305 326 - -
Glsi02g0696 469 MobiDBLite consensus disorder prediction 341 379 - -
Glsi02g0696 469 Gene3D - 208 269 - -
Glsi02g0696 469 ProSiteProfiles Myb-like domain profile. 212 263 IPR001005 -
Glsi02g0696 469 Gene3D - 270 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0696 Glsi-ChrGlsi02 4521502 4523106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0696 104 420 MYB Transcription Factor Family AT4G18770 50.286 7.10e-98 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi02g0696 Myb_DNA-bind_6 4.8e-19 CL0123