Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi02g0685 | ATGTGGGTATTTTTTACATCCACCACCGTGTTCTTCTCTCTCGCTTCCTCCACCACCCCTGACGATCAACTATGTAAAGCTGGCGTCGTGTGCGGGTCCTCTCAGTACTACGATAAGGGTCGGCTCCTCGAAAATTTCATAGCTGTAATGGACATGGTCTCCAATAAGGTAAACCAACAAGGCTGGGGTGTCGAGGCAGTCACTGCCACCCCACCTGCAATCTACGCCTTAGGCCAATGCCACCACAATCTCAATCGCGCGCAGTGCTCCAGCTGTTTCATCAAAGCTAGACAATGCCTACCCAAATGCCTACCCTCCCTCTCGGGTCGGATTCATCTGGATGGCTGCTTCCTTCGCTACGACAATTACTTATTCTTCAACGAAAGCGTGGACCGGCATCGTGACAAAAATATATGCCAAACGCCGACCAAAGTTTTGAAGAAAGAAGATTTTCTGAAACCGGATTTCTCGAAACGGGTTGCAGAGGTGATTTTGAACGTGACAATGGAAGCGGGAAAACACAAATTCGCTACAGGAGTTGTGGGAGGGCAAGGGGCGGATGTTTTTGCGTTGGCGCAGTGCTGGGAAATCCTAGATAATTTTTCTTGCGATAGATGCTTGGAAGAAGCTGGGAAACACGCTCTGACTTGTGCCCATGGTGGTGGGGGCAGGGGCCTATACACTGGTTGCTTTTTGAGGTATTCAACCCGCAAATTCTATAACGAAGCTGAAGAAATAGAGATAAAGCACCCTGTAGAAAGGTCAAAAGTTGGGACGATTGTAGCGGGTGTTTTATCAGCAGTTACATTAGTTTTACTTATTATCCTTGGAGCTTTTATAAGCTGGAAGAAGAGAGAAGATTCGAAAAGCAACAGTTTTTGTAGGATGCCAGATTCTGCCAACAAAACTGGTTTACATTTTAAGTATGAGTTGCTGGAGAAGGCCACAGATTTTTTTGACCCCTCGAGGAAATTAGGCCAAGGTGGAGCTGGTTCTGTATTCAAAGGAACCCTCCCAACAGGGATGACTGTAGCTGTAAAAAGATTGTTTTTTAATACGCGACAATGGGTAGATGAGTTTTTCAATGAGGTCAATTTGATTAGTGGGATAGAACACAAGAATCTGGTCAAACTTCTGGGATGCAGCATTGAAGGCCCTGAAAGCCTGCTGATTTATGAATTTCTGCCCAACAGAAGTTTGGATCAAATCCTTTTCGGGAAGGACAAAGGGGATATTCTAACTTGGCAGCAACGATTTCAAATAATCTGTGGGACAGCTGAGGGATTAGCATATCTTCATGGAGATAAATCTCATCTTAGCACTGGAATTGCTGGGACACTACCATCCATGTCTGAAGTGGTTCAGATGCTTACCAACAAGGACTATATTATTCCCTTCCCAAAGCAACCACCATTCCTGAATGCTAGTGTGATAAGTCCAGATGACCGCACCGAAACTTCCACCATGAGCTCTTTGTTTTCAAATGAGCCTGCATGTGAATATTCCTCTTTCCAAAGTGCCAGGTCCTCAACCTCAAGTGAGCATTCAAAACCGGATGATTCCTTTTCTTCAACCATTGGAGCACCTGAGCCAAGGTAG | 1599 | 0.4547 | MWVFFTSTTVFFSLASSTTPDDQLCKAGVVCGSSQYYDKGRLLENFIAVMDMVSNKVNQQGWGVEAVTATPPAIYALGQCHHNLNRAQCSSCFIKARQCLPKCLPSLSGRIHLDGCFLRYDNYLFFNESVDRHRDKNICQTPTKVLKKEDFLKPDFSKRVAEVILNVTMEAGKHKFATGVVGGQGADVFALAQCWEILDNFSCDRCLEEAGKHALTCAHGGGGRGLYTGCFLRYSTRKFYNEAEEIEIKHPVERSKVGTIVAGVLSAVTLVLLIILGAFISWKKREDSKSNSFCRMPDSANKTGLHFKYELLEKATDFFDPSRKLGQGGAGSVFKGTLPTGMTVAVKRLFFNTRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLIYEFLPNRSLDQILFGKDKGDILTWQQRFQIICGTAEGLAYLHGDKSHLSTGIAGTLPSMSEVVQMLTNKDYIIPFPKQPPFLNASVISPDDRTETSTMSSLFSNEPACEYSSFQSARSSTSSEHSKPDDSFSSTIGAPEPR | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi02g0685 | 532 | ProSiteProfiles | Protein kinase domain profile. | 319 | 532 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Glsi02g0685 | 532 | MobiDBLite | consensus disorder prediction | 475 | 494 | - | - | |
| Glsi02g0685 | 532 | ProSiteProfiles | Gnk2-homologous domain profile. | 133 | 239 | IPR002902 | - | |
| Glsi02g0685 | 532 | Gene3D | - | 147 | 239 | IPR038408 | - | |
| Glsi02g0685 | 532 | Gene3D | - | 26 | 125 | IPR038408 | - | |
| Glsi02g0685 | 532 | SUPERFAMILY | Protein kinase-like (PK-like) | 303 | 433 | IPR011009 | - | |
| Glsi02g0685 | 532 | Pfam | Protein tyrosine and serine/threonine kinase | 322 | 435 | IPR001245 | GO:0004672|GO:0006468 | |
| Glsi02g0685 | 532 | ProSiteProfiles | Gnk2-homologous domain profile. | 24 | 125 | IPR002902 | - | |
| Glsi02g0685 | 532 | Gene3D | Transferase(Phosphotransferase) domain 1 | 396 | 441 | - | - | |
| Glsi02g0685 | 532 | MobiDBLite | consensus disorder prediction | 479 | 494 | - | - | |
| Glsi02g0685 | 532 | Pfam | Salt stress response/antifungal | 43 | 123 | IPR002902 | - | |
| Glsi02g0685 | 532 | Pfam | Salt stress response/antifungal | 155 | 236 | IPR002902 | - | |
| Glsi02g0685 | 532 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 75 | 435 | - | - | |
| Glsi02g0685 | 532 | MobiDBLite | consensus disorder prediction | 503 | 532 | - | - | |
| Glsi02g0685 | 532 | MobiDBLite | consensus disorder prediction | 503 | 523 | - | - | |
| Glsi02g0685 | 532 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 283 | 394 | - | - | |
| Glsi02g0685 | 532 | Gene3D | Phosphorylase Kinase; domain 1 | 279 | 394 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi02g0685 | Glsi-ChrGlsi02 | 4453152 | 4456748 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi02g0685 | 2 | 447 | Receptor kinase-like Gene Family | AT5G40380 | 43.621 | 8.60e-119 | 357 |
Transcription factors information