Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi02g0661 | ATGGCATCATCCAGCAGCTCTTACAATTCTCCATGTGCTGCCTGCAAATTCTTGAGGAGGAAATGCATGCCAGGTTGCATCTTTGCTCCTTACTTCCCACCTGAAGAGCCCCAGAAATTCGCCAACGTCCACAAAATTTTTGGCGCTAGCAATGTCACTAAGCTCCTTAACGAACTCCTCCCTCACCAGAGGGAAGATGCAGTGAATTCCCTTGCCTATGAAGCAGAGGCTCGCGTCAGGGACCCAGTTTATGGCTGCGTAGGTGCCATCTCTTTCCTCCAGAGACAGGTTCAAAGGCTTCAAAAGGAGCTTGATGCTGCTAACGCTGATCTGCTGCGTTATGCCTGCAATGACATGCCTCCGGCAGGAATGGCTTCGGTTCAACCAATGCCTCAAAGGCAAAGGCCTATGGAGTTTGGTGGAAGATCAGGTGGGTATACTCTTCCTTATTCTCTTCCATGGACTGATTCCTCTAATTTGGAGGGTGGAGGAGGAGGAGGAGGAGGCATGTGCAATGTGCATGCTGATCGAGTTGACATTCCCTGTCATTGTTTATGA | 558 | 0.4982 | MASSSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYACNDMPPAGMASVQPMPQRQRPMEFGGRSGGYTLPYSLPWTDSSNLEGGGGGGGGMCNVHADRVDIPCHCL | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi02g0661 | 185 | Pfam | Lateral organ boundaries (LOB) domain | 11 | 108 | IPR004883 | - | |
Glsi02g0661 | 185 | ProSiteProfiles | LOB domain profile. | 10 | 111 | IPR004883 | - | |
Glsi02g0661 | 185 | Coils | Coil | 90 | 117 | - | - | |
Glsi02g0661 | 185 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 9 | 128 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi02g0661 | Glsi-ChrGlsi02 | 4294448 | 4295341 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi02g0661 | 1 | 163 | AS2 family | AT5G63090 | 66.304 | 1.13e-78 | 231 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Glsi02g0661 | LOB | 2.8e-42 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Glsi02g0661 | 02 | 4294448 | 4295341 | Glsi13g1325 | 13 | 30623413 | 30630779 | CCT | |
Glsi02g0661 | 02 | 4294448 | 4295341 | Glsi13g1325 | 13 | 30623413 | 30630779 | ECH | |
Glsi02g0661 | 02 | 4294448 | 4295341 | Glsi02g0661 | 02 | 4294448 | 4295341 | ECH |