Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0656 ATGGGTCGCCATTCTTGTTGCCTAAAGCAAAAATTGAGGAAAGGTTTATGGTCCCCTGAAGAAGATGAGAAGCTCTTCAACTACATAACCAGTTACGGTGTTGGGTGCTGGAGCTCGGTTCCCAAACTAGCTGGGCTTCAAAGATGTGGAAAGAGTTGCAGATTGAGATGGATTAATTATTTGAGGCCTGACTTGAAGAGAGGGATGTTCTCACAACAAGAGGAGGATCTTATAATCGGTCTTCATGAAGTTCTCGGCAATAGGTGGGCTCAGATTGCAGCACAGTTACCGGGAAGAACAGATAATGAGATTAAGAACTTCTGGAATTCATGTCTAAAGAAGAAGCTGTTGAAGCAAGGGATTGACCCAACCACGCACAAGCCCCTTCCTGAAGCTCAAATAGAGGAGAGCAAGAAAATTACAGAGACCCCATTGTCGATGCAAATACCACTATCTCAAGGACTTTCAGCTACGGCAAACTTAGGCTTCTCATCACAGGGGTCAGCACTTGTAGTAAGCGACTCGAATCATTTTGATGGTTGTGGGTTAACAGGAGCTTCAAGAGAAGTTTTCATGAGCAAGCCAGCTTTGGACCCATTGTCCTACCTTGAGTTCCAAATGGGTACGGTTATGCAGTCTGGTTATAATGATTCGAGCCATTATCACACTTCAGGCGTTAGAGCATTTGATCAGAACCAGGTGGGAATGAGTTCAGGCTATGGATTCCCTTCAATTCCAAGTTTAACCAATTCTGATCAGGGAAACGTGTCGGTGACACAGTTCCCAGATAAAAATTCACCTTCCAAAATCAGTTCTTTGTTCATGAATAGTAATGAGATGAAAGAAAGCTCAAGCAATAGCTCGAACATGAGCAATTATCCAGGAGGAGGGTGTCACATAAGCAGATTGATGGAGAATAATGCAGGGTTCTCTTCATGGGAAGGGGATAACAAAATGGACCCCTTGTTTCAATTTCATGTCAATGCTATAAAAACTGAAGAATTCAAGATAAGTTCATGGCAAGAAGGGCAGTTTCAGACTCACAGTTCCTTAGATTTCACCGGCTGCTATCCGTTAACGTCACTGTCAGAAGATCTAACAGCAGCAAATTTTGATGTATTCCAGCATATATGA 1134 0.4295 MGRHSCCLKQKLRKGLWSPEEDEKLFNYITSYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIIGLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLLKQGIDPTTHKPLPEAQIEESKKITETPLSMQIPLSQGLSATANLGFSSQGSALVVSDSNHFDGCGLTGASREVFMSKPALDPLSYLEFQMGTVMQSGYNDSSHYHTSGVRAFDQNQVGMSSGYGFPSIPSLTNSDQGNVSVTQFPDKNSPSKISSLFMNSNEMKESSSNSSNMSNYPGGGCHISRLMENNAGFSSWEGDNKMDPLFQFHVNAIKTEEFKISSWQEGQFQTHSSLDFTGCYPLTSLSEDLTAANFDVFQHI 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0656 377 FunFam Transcription factor MYB86 69 137 - -
Glsi02g0656 377 CDD SANT 70 109 IPR001005 -
Glsi02g0656 377 Gene3D - 69 143 - -
Glsi02g0656 377 SMART sant 13 63 IPR001005 -
Glsi02g0656 377 SMART sant 66 114 IPR001005 -
Glsi02g0656 377 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Glsi02g0656 377 CDD SANT 17 61 IPR001005 -
Glsi02g0656 377 PANTHER MYB DOMAIN PROTEIN 55 1 299 - -
Glsi02g0656 377 FunFam Myb transcription factor 11 67 - -
Glsi02g0656 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Glsi02g0656 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Glsi02g0656 377 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Glsi02g0656 377 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Glsi02g0656 377 Gene3D - 11 67 - -
Glsi02g0656 377 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Glsi02g0656 377 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0656 Glsi-ChrGlsi02 4263838 4265173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0656 1 166 MYB Transcription Factor Family AT1G57560 70.414 3.23e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi02g0656 Myb_DNA-binding 1.3e-13 CL0123