Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0647 ATGGCAACGCCCTCGTTCCTCTTCATCTTCCTCTTCCACCTCTTTCTCTCTCCCATCTCAGCTCTTGACTTCCTCTTCAATTCCTTCAACGGCCTCATCAATGGCACCAATCTCACTCTCATCAACGATGCCCGACTCGACCGCTCTGTCATCCGCATGACCAACGATTCCAACCAGTACTCCTTCGGACGATCTTTCTACCCCACCGCGATCAGGATGAAACCCACCTCAAATTCCACCAACATTTCTTCTTTTTCTACTTCCTTCGTCTTCTCCATCTTGCCCAAGATCTCTACGAGTCCGGGATTTGGTCTTGCCTTCGTGCTAACCAACACCATGTCTCCTCCAGGTGCGCTCGCAAGCCAGTACTTTGGTCTCTTCACAAACGCCACTACTCCTATTGTTGCTCCCCTGCTTGCCGTAGAATTCGATACTGGACAGAACCCAGAGTTTAATGACCCAGATGATAATCACATCGGAATCGACTTGAATAACATCGAATCCCAATTGACAAAACCCGCTGGCTACTATAACTCCAGTGGCGGTTTTGTGCCTATTCGCATGCGCGATGGTAAGAATGTTCGAGCTTGGATAGAATTCGATGGCGCAAATTTGGTGATCAATGTTACGGTTGCGCCCATCGGTGTGCCTCGTCCATCTATGCCAACTCTTTCGTATAATGGTTCCACTATAGCGAATTATGTGTCTGCAGAGATGTATGTTGGATTTTCGGCATCGAAGACCAATTGGGTTGAGGCACAAAGACTTCTGGCTTGGAGCTTCAGTGATACTGGGAAAGCGAGAGACATAAATACCACAAATTTACCAGTTTTTGGTCCAGAATCGTCTTCTTCGAAGCTTTCAGCTGGGGCAATTGCTGGGATTATAATTGGTTGCTTTGCTTTCGTGATAATTTGTGCATCTGGGTGTTACTTGTGGTGGCGAAACAACAAAATGAAAGACCAAGAGGAAGAAATTGAAGATTGGGAGCTGGAGTACTGGCCTCACAGGTTCTCTTATGAGGAGCTCAGCGCGGCCACTGGTGAATTCTACAAGGACCACCTCCTGGGTTCGGGAGGATTTGGCAGAGTTTATAAAGGAACACTACCGAACAACACAGAAATTGCAGTCAAATGCGTCAACCACGATTCTAAACAGGGGTTACGAGAATTTATGGCAGAGATTTCAAGTATGGGTAGGCTCCAACACAAAAACCTAGTTCAAATGCGGGGATGGTGCAGAAAAGGCAACGAACTCATGCTTGTCTACGATTACATGCCCAATGGAAGCCTCAATAAATGGATTTTTGACAAACCCAAAAAGCTCCTAGGTTGGGAACAACGCCGTCGAATCCTCATCGATGTCGCAGAGGGACTAAACTATCTCCACCATGGTTGGGACCAAGTGGTAATTCACAGAGACATCAAATCCAGCAACATATTGTTGGATTTGGACATGAGGGGTAGGCTAGGAGACTTTGGTCTTGCTAAGCTTTACCAACAAGGTGAAGTTCCAAACACGACAAGGGTGGTGGGTACGTTGGGTTATTTGGCGCCGGAGCTGGCAAATGTTGCTGCGCCGACATCAGCAAGCGACGTGTACAGCTTCGGAGTGGTGTTGTTGGAGGTCGCCTGTGGGCGAAGACCGATCGAAACGTCGGCGCTGGAGGAGGAAGTGGTGCTGATTGATTGGGTGAGGGATTTGTACGCGAAAGGGAATGCCGTTGAGGCAGCTGATCCTAGGATTGATGGCGAGTACCATGTGGGAGATATGGAAATGGTGTTGAAGCTTGGTTTGGCTTGCTGTCACCCGGATCCGCAGAGGAGGCCAACCATGAAGGAGGTGATTGTCCTCTTGGTGGGGGAGGAAGTGCCAGCAGCGCCGGCGGAATTATTGTCTGAATTGGCTCGCGGTGATAGCGGCACCGTGGATGGTGGGGACGACGGCGGATCACGAGAGGCGGCGCCGCTGAAAACCACACAGGCGGTATGA 1992 0.4945 MATPSFLFIFLFHLFLSPISALDFLFNSFNGLINGTNLTLINDARLDRSVIRMTNDSNQYSFGRSFYPTAIRMKPTSNSTNISSFSTSFVFSILPKISTSPGFGLAFVLTNTMSPPGALASQYFGLFTNATTPIVAPLLAVEFDTGQNPEFNDPDDNHIGIDLNNIESQLTKPAGYYNSSGGFVPIRMRDGKNVRAWIEFDGANLVINVTVAPIGVPRPSMPTLSYNGSTIANYVSAEMYVGFSASKTNWVEAQRLLAWSFSDTGKARDINTTNLPVFGPESSSSKLSAGAIAGIIIGCFAFVIICASGCYLWWRNNKMKDQEEEIEDWELEYWPHRFSYEELSAATGEFYKDHLLGSGGFGRVYKGTLPNNTEIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWIFDKPKKLLGWEQRRRILIDVAEGLNYLHHGWDQVVIHRDIKSSNILLDLDMRGRLGDFGLAKLYQQGEVPNTTRVVGTLGYLAPELANVAAPTSASDVYSFGVVLLEVACGRRPIETSALEEEVVLIDWVRDLYAKGNAVEAADPRIDGEYHVGDMEMVLKLGLACCHPDPQRRPTMKEVIVLLVGEEVPAAPAELLSELARGDSGTVDGGDDGGSREAAPLKTTQAV 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0647 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 277 IPR013320 -
Glsi02g0647 663 SMART serkin_6 350 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0647 663 CDD lectin_legume_LecRK_Arcelin_ConA 22 265 IPR001220 GO:0030246
Glsi02g0647 663 FunFam L-type lectin-domain containing receptor kinase S.4 20 269 - -
Glsi02g0647 663 Gene3D Phosphorylase Kinase; domain 1 312 425 - -
Glsi02g0647 663 ProSiteProfiles Protein kinase domain profile. 350 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0647 663 FunFam L-type lectin-domain containing receptor kinase S.4 426 630 - -
Glsi02g0647 663 Gene3D Transferase(Phosphotransferase) domain 1 426 624 - -
Glsi02g0647 663 PANTHER - 49 623 - -
Glsi02g0647 663 MobiDBLite consensus disorder prediction 635 663 - -
Glsi02g0647 663 FunFam L-type lectin-domain containing receptor kinase S.1 335 425 - -
Glsi02g0647 663 Pfam Protein kinase domain 352 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0647 663 ProSitePatterns Legume lectins beta-chain signature. 139 145 IPR019825 -
Glsi02g0647 663 Pfam Legume lectin domain 22 275 IPR001220 GO:0030246
Glsi02g0647 663 CDD STKc_IRAK 356 616 - -
Glsi02g0647 663 Gene3D - 20 276 - -
Glsi02g0647 663 SUPERFAMILY Protein kinase-like (PK-like) 326 619 IPR011009 -
Glsi02g0647 663 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Glsi02g0647 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0647 Glsi-ChrGlsi02 4215935 4217926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0647 17 621 Receptor kinase-like Gene Family AT1G15530 69.294 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi02g0647 Pkinase 2.8e-51 CL0016