Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0646 ATGCCTGCCAACACCTCTTACTCCAGTTTTCAAGCTCCAACTCCACAATCTTCCTCCCTCTCTCTCTCTCTAGAGTTGGAACTTTCCCTTTTTTTCCCTTTCTTTCCAAACTCACTTAAACAAGGTAACTCAGAGTCAGTCATGGATTCCAAACGCAGACTTAATATTAAGTTCCTTTGTAGCTATGGTGGCAAGATTCTTCCCCGTATTACCGACGGCAAGCTTCGCTACGTCGGTGGCCACACCAGAGTTCTCTCCGTTGATCCTTCTATTACTTTTTCAGAACTGATGGTGAAGCTGGGAGAGTTCTGTGGTTCGTCTGTGATCTTGAAGTGTTCATTGCCCAACGGAGATCTCGAGACGTTGATTTCGATTACAAGCGATGAAGATTTGGCCAATATAATTGAGGAATACAATCGAGCCTCGTCGTCGTTGTCTCATCCGTTGAAGATCAGAGCTATTCTTTCGCCGCCGAAATCTCTCAAGAAAATATCTCCTCCTCAGTCTTCTTCGCCGAGCGTCAACCAATCTCCGACAAGATCGGTACACTCCTCTACTGATTCTCCGTCGTACTCCACGGCGTATCGGTTCGTCCGTCCGGTTGCATATCCAGTTGGCGTCCGTAACGGCTCGGGAAAAGCCTGTTGCTATACCGGTCAATTCGATGGAAGCCCTAGATTTTGGTATTGTGGACCCCGTAGCAACAATTTCTGTCACTGA 720 0.4722 MPANTSYSSFQAPTPQSSSLSLSLELELSLFFPFFPNSLKQGNSESVMDSKRRLNIKFLCSYGGKILPRITDGKLRYVGGHTRVLSVDPSITFSELMVKLGEFCGSSVILKCSLPNGDLETLISITSDEDLANIIEEYNRASSSLSHPLKIRAILSPPKSLKKISPPQSSSPSVNQSPTRSVHSSTDSPSYSTAYRFVRPVAYPVGVRNGSGKACCYTGQFDGSPRFWYCGPRSNNFCH 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0646 239 Pfam PB1 domain 72 143 IPR000270 GO:0005515
Glsi02g0646 239 CDD PB1_UP2 59 155 - -
Glsi02g0646 239 Gene3D - 74 155 - -
Glsi02g0646 239 SMART PB1_new 70 158 IPR000270 GO:0005515
Glsi02g0646 239 MobiDBLite consensus disorder prediction 161 190 - -
Glsi02g0646 239 PANTHER OS05G0427100 PROTEIN-RELATED 45 184 - -
Glsi02g0646 239 MobiDBLite consensus disorder prediction 162 190 - -
Glsi02g0646 239 SUPERFAMILY CAD & PB1 domains 72 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0646 Glsi-ChrGlsi02 4212474 4213281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0646 42 140 MAP Kinase Kinase Kinase AT3G46920 46.465 1.24e-26 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0646 02 4212474 4213281 Glsi13g1336 13 30701234 30701891 CCT
Glsi02g0646 02 4212474 4213281 Glsi02g0646 02 4212474 4213281 ECH