Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0634 ATGCCGCAAGATTCCTCCGAGCAAGACCTTGACGATCCTGATTCTCAGTTCGTGGAGATTGATCCCAGCGGTCGATATGGTCGGGTCGGTTTTCATTTTATTTTGTCACTTTCATTTTTATTTATTCTGTATTTGGTTTTCGATTATAGTCAGTTCTTTACCAAATCTAATTTGATGCTGAATGTTGATTCTCTATGCTGTCTGTTATACTGATATAGAGCATTTGATGAGTTGGAAGGAATCGAAGTGGCTTGGAATCAGGTTAAGGTAACAGATGTATTGCGTAACAACGAAGATTTTGAGCGCCTATATTCAGAAGTTCATTTACTGAAGACTTTGAAGCATAAAAATATAATTAAATTGTACAGTTCTTGGGTTGACACAAGGCATGAGAACATTAACTTCATCACTGAAATTTTCACGTCTGGAACATTACGACAATATAGGAAGAAACATAAGCATGTTGACTTGAGAGCATTGAAGAAATGGTCTAGGCAGATTTTGGAGGGTCTTTCTTATCTACACAGTCATGATCCACCAGTTATTCATCGAGATTTAAAGTGTGACAATCTTTTTGTCAATGGGAATCATGGCGAGGTTAAAATTGGTGACTTAGGATTGGCTGCCATTCTTCAGCAGGCCAATTCAGCTCACAGTGTTATAGGTACTCCGGAGTTTATGGCCCCTGAGCTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATGCTTTTGGCATGTGCGTGCTTGAATTGGTGACCTTTGAGTATCCATATGTTGAATGTGCCAATGCTGCTCAGATATACAAGAAAGTGACATCGGGAATAAAACCAGCTTCATTGGCAAAGGTGACAGATCCTGGAGTCAAAGCATTTATAGAAAAGTGTATTGCAAAGGTTTCTGAGCGGTTGCCTGCAAAGAAACTCTTAATGGATCCCTTTCTTCAGCCAGATTATGACAGTGACAGTGTAGGTCGTTCTTTAAGGTCCAAAACTCATGATTTAGGATGTAGTAGTGGCCGACATGCTATTGATAAATATGCTGAAGACACTTCTGCTGAGACAGGTAGGGAGTTCAGAGTGGAAGGTCAAATGAGTGATGTTAATACTATATTTCTAAAACTGCGAATAGCAGACTCGTCAGGTCATATTCGCAACATTCACTTCCCTTTTGATATTGAGGCAGACACAGCAATTTCTGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTCACGGATCAAGATGTTACAACTATTGCTGAGATGATTGACTTAGAAATTCGATATCTCATTCCAAACTTGGATCCTAAAGAAATACCTCCTGCAGGTAGTTTTGGTCAAGAATTAGCAGTTTCAGGTGTCTATGCCTCTGAAACTAGGAATGAGGCTTCTCCACCTGGAAAGGATTCTACTGCTTGTACTGGTAGTCTTGCACTAGAAAGATTACCTTCAGGTCGTAATTACTGGTCTGACTCACCCAAGGCAGTTGTTAGAAACCATCTAAAATGGCCTGATGCTTCAAAATTGTCTTGTGAAGTGGACGCAAGTACTGAGGAAGGAAGTTCGGCTGTAAATGGTGCTACTTCAGTGGAGCAGCAGGCTGGCAACTGTACTTGTGATGGTGATTATAATGTAGAGAATGAATTTTGTGGGACTGCTGATTCCCGTTCCAGTGAGAGAAGTATTACATCCGAGAATTTACATGCAAGCAATGGACAATCTGCTCTGGAAGAAATATCTAGAAAATTGAAAGATATTGAATTGGAAGAAGTCAACGTAATTGCCGCAAAACTTCAGAAATTATTGGTAAGACAGCGAGAGGAGTTAGATGAACTAAAGAAGAAGCATGAATTAGCTGTCTCAGATTTTCTGAAGGAACTTCCTCCAGAAATACGCCACAAGGTCTTACTTATATGCAACCTGGAGAAATCTGATGGTGGAAATGTAGAGTGA 1953 0.4004 MPQDSSEQDLDDPDSQFVEIDPSGRYGRVGFHFILSLSFLFILYLVFDYSQFFTKSNLMLNVDSLCCLLYXYRAFDELEGIEVAWNQVKVTDVLRNNEDFERLYSEVHLLKTLKHKNIIKLYSSWVDTRHENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLSYLHSHDPPVIHRDLKCDNLFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCVLELVTFEYPYVECANAAQIYKKVTSGIKPASLAKVTDPGVKAFIEKCIAKVSERLPAKKLLMDPFLQPDYDSDSVGRSLRSKTHDLGCSSGRHAIDKYAEDTSAETGREFRVEGQMSDVNTIFLKLRIADSSGHIRNIHFPFDIEADTAISVASEMVEELELTDQDVTTIAEMIDLEIRYLIPNLDPKEIPPAGSFGQELAVSGVYASETRNEASPPGKDSTACTGSLALERLPSGRNYWSDSPKAVVRNHLKWPDASKLSCEVDASTEEGSSAVNGATSVEQQAGNCTCDGDYNVENEFCGTADSRSSERSITSENLHASNGQSALEEISRKLKDIELEEVNVIAAKLQKLLVRQREELDELKKKHELAVSDFLKELPPEIRHKVLLICNLEKSDGGNVE 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0634 650 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 622 - -
Glsi02g0634 650 FunFam probable serine/threonine-protein kinase WNK9 140 320 - -
Glsi02g0634 650 SUPERFAMILY Protein kinase-like (PK-like) 72 328 IPR011009 -
Glsi02g0634 650 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 373 424 IPR024678 GO:0004674|GO:0005524
Glsi02g0634 650 Coils Coil 569 622 - -
Glsi02g0634 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Glsi02g0634 650 Gene3D Transferase(Phosphotransferase) domain 1 140 321 - -
Glsi02g0634 650 CDD STKc_WNK 72 315 - -
Glsi02g0634 650 SMART serkin_6 72 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0634 650 Gene3D - 369 433 - -
Glsi02g0634 650 Gene3D Phosphorylase Kinase; domain 1 67 138 - -
Glsi02g0634 650 ProSiteProfiles Protein kinase domain profile. 15 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0634 650 Pfam Protein kinase domain 72 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0634 650 FunFam Probable serine/threonine-protein kinase WNK1 44 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0634 Glsi-ChrGlsi02 4153267 4156682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0634 589 645 MAP Kinase Kinase Kinase AT3G48260 45.614 4.02e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Glsi02g0634 Pkinase 1e-45 CL0016