Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0605 ATGGCATCAAGCGAGGGATTTCTGACAGATGAGCAGAGGGAAACGCTAAAAGTTGCCAGCAATAATGTGGAAAGTTTATCTTCATCACCAAAATCTCTCACATCCTTTGTTGCTGAACATCATGTAAAAGCACCTGCTGGTGGTAAGGCACAAACTGCTGGGATTGCTGTGAGGCATGTGCGACGATCACACTCTGGAAAGCTTGTGCGGGTGAAGAAGGATGGTGCTGGTGGTAAGGGCACTTGGGGAAAATTGCTTGATACTGATGGTGAGTCTCGTATTGACAGAAAAGATCCAAACTATGACAGTGGTGAGGAACCCTATCAGCTGGTTGGGTCTACAGTTACTGACCCCTTAGATGAATTCAAGAAGGCAGTGATGTCCACGATAGAGGAATATTTCAGCACTGGTGATGTGGAATTGGCTACATCTGACCTCAGAGAACTTGGCTCTAGTGAATATTATCCATACTTCATCAAGCGCCTTGTGTCTGTGGCCATGGATAGGCATGATAAGGAGAAAGAAATGGCTTCTGTTCTGCTTTCTGCATTGTATGCCGATGTCATCAGTCCTGCACAAATTAGAGACGGATTTTTTATGCTTATTGAATCTGCTGATGATCTTGCAGTGGACATACTGGATGCAGTTGACATCCTTGCTTTATTTGTGGCTCGTGCTGTTGTTGATGACATCCTTCCTCCAGCTTTTCTTGCCAGGGCAAAAAAGGCACTTCCTGAATCTTCTAAGGGGGTTCAGGTAATACAGACTGCTGAGAAGAGTTATCTCTCAGCTCCACACCATGCAGAACTTGTGGAGAGGCGGTGGGGTGGTAGCACTCACATTACTGTCGAAGAAGTGAAGAAGAAGATTGCTGATTTATTAAGAGAATATATTGATAGCGGTGACACATTTGAAGCCTGTAGGTGTATAAGGGAGTTGGGGGTTTCATTCTTCCATCATGAGGTTGTGAAGAGGGCTCTGGTATTTGCCATGGAGATCCGTTCGGCAGAACCTTTAATGTTGAAGCTATTAAAAGAAGCAGCAGAAGAAGGACTCGTTAGTTCCAGCCAAATGGTTAAAGGTTTTTCTCGTTTGGCAGAAGGCCTGGATGATCTTGCTCTTGATATTCCATCAGCTAAAGCCTTGTTTCAGTCTTTGGTCCCCAAGGCAATATCTGAAGGATGGCTTGATGCTTCATTTATGAAACCCTCTGGTGAAGATGGGGATATTCAAGTTGAGGATGAAAAGTTGAGGAAGTACAAAAATGAGGCAGTAACTATAATTCATGAATATTTTCTCTCTGATGATATTCCTGAACTCATTCGAAGTCTTGAAGATATTGGGGCCCCTGAGTATAACTCAATATTTTTGAAGAAGGTAATCACTCTTGCTATGGATAGAAAAAACAGGGAAAAGGAAATGGCATCTGTACTGCTATCGGCTCTTCATATAGAGATATTCTCAACAGAGGATATAGTTAATGGTTTTGTCAGGCTTCTGGAAAGTGCAGAAGATACAGCACTGGATATATTGGATGCTTCAAATGAGCTTGCCCTTTTTCTTGCTCGGGCTGTGATTGATGATGTATTGGCCCCTCTGAATTTAGAAGAAATTGGCAGCAGGTTGCCACCAAAATGTAGTGGGAGTGAAACTGTGCGTATGGCCCGATCACTCATTGCTGCACGTCATGCTGGTGAGAGGCTATTGAGATGTTGGGGTGGTGGGACTGGATGGGCTGTTGAGGATGCTAAGGACAAGATCATGAAGCTCTTGGAGGAGTTCGAAAGTGGGGGTGTGGTGAGTGAAGCGTGCCAGTGTATTCGTGACCTTGCAATGCCTTTCTTTAACCATGAGGTAGTGAAGAAAGCTCTGGTTATGGCTATGGAGAAGAAGAATGATAGGATGCTGGATCTGCTGCAGGAATGCTTCAGTGAAGGTCTGATTACCATCAATCAGATGACTAAAGGGTTCACCCGCATCAAGGATGGTCTTGATGATCTGGCTCTGGACATTCCAAATGCAAAGGAGAAATTTGGCTTATATGTGGAACAAGCACTTAGTAAGGGTTGGCTTCTACCATCATTTGATTCGTCAGATGTCTAA 2103 0.4408 MASSEGFLTDEQRETLKVASNNVESLSSSPKSLTSFVAEHHVKAPAGGKAQTAGIAVRHVRRSHSGKLVRVKKDGAGGKGTWGKLLDTDGESRIDRKDPNYDSGEEPYQLVGSTVTDPLDEFKKAVMSTIEEYFSTGDVELATSDLRELGSSEYYPYFIKRLVSVAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLIESADDLAVDILDAVDILALFVARAVVDDILPPAFLARAKKALPESSKGVQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYIDSGDTFEACRCIRELGVSFFHHEVVKRALVFAMEIRSAEPLMLKLLKEAAEEGLVSSSQMVKGFSRLAEGLDDLALDIPSAKALFQSLVPKAISEGWLDASFMKPSGEDGDIQVEDEKLRKYKNEAVTIIHEYFLSDDIPELIRSLEDIGAPEYNSIFLKKVITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVRLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEFESGGVVSEACQCIRDLAMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAKEKFGLYVEQALSKGWLLPSFDSSDV 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0605 700 Pfam MA3 domain 122 233 IPR003891 -
Glsi02g0605 700 Pfam MA3 domain 421 530 IPR003891 -
Glsi02g0605 700 Pfam MA3 domain 584 691 IPR003891 -
Glsi02g0605 700 Pfam MA3 domain 286 397 IPR003891 -
Glsi02g0605 700 ProSiteProfiles MI domain profile. 419 540 IPR003891 -
Glsi02g0605 700 MobiDBLite consensus disorder prediction 86 103 - -
Glsi02g0605 700 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
Glsi02g0605 700 FunFam programmed cell death protein 4 113 264 - -
Glsi02g0605 700 SUPERFAMILY ARM repeat 579 695 IPR016024 -
Glsi02g0605 700 SMART ma3_7 122 233 IPR003891 -
Glsi02g0605 700 SMART ma3_7 583 692 IPR003891 -
Glsi02g0605 700 SMART ma3_7 286 397 IPR003891 -
Glsi02g0605 700 SMART ma3_7 420 531 IPR003891 -
Glsi02g0605 700 Gene3D - 272 404 - -
Glsi02g0605 700 Gene3D - 570 697 - -
Glsi02g0605 700 PANTHER PROGRAMMED CELL DEATH 4 3 696 IPR039778 GO:0045892
Glsi02g0605 700 FunFam programmed cell death protein 4 409 563 - -
Glsi02g0605 700 SUPERFAMILY ARM repeat 119 279 IPR016024 -
Glsi02g0605 700 Gene3D - 114 262 - -
Glsi02g0605 700 Gene3D - 410 563 - -
Glsi02g0605 700 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Glsi02g0605 700 MobiDBLite consensus disorder prediction 80 106 - -
Glsi02g0605 700 SUPERFAMILY ARM repeat 418 575 IPR016024 -
Glsi02g0605 700 SUPERFAMILY ARM repeat 282 402 IPR016024 -
Glsi02g0605 700 ProSiteProfiles MI domain profile. 582 700 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0605 Glsi-ChrGlsi02 3959587 3962943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0605 586 679 Eukaryotic Initiation Factors Gene Family AT4G30680 31.959 4.51e-09 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0605 02 3959587 3962943 Glsi02g0605 02 3959587 3962943 ECH