Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0585 ATGATTCCTCCTCCGCTTTATAGTGCCTATAAAGGTGAGTTGGGAGATGATGGTCAGAACCCAGTATTTGGCCTTGTTTTTCATCGTTCCGCAAAGGGTTGCTTTGCCCATCCTCATATTCCGATTTTGGAAAGTAGAATTTCTTCTTGGACCCTCCTCCTTTCTGAAGAAACCAACGAAGAAAATAATAACAAAAGTATAAAGAGAAACATAAGTATCATCCCTGACAGTGGAAGCAGCAGGAGTGTGAATAGCTTGCCAAGGCTCCATTTCAGGGACCACATATGGACTTATACTCAAAGATACCTTGCTGCTGAAGCTGTTGAAGACATAATCAATTCTGAGCTAAGTGGAGCAGAAGAAGAAGATGGATGTGCTGATGGAATGAAGCTTGTTCAGTTTCTAATCGTTTGTGCTGAAGCTGTGGCTTGTCGTGACAAATCACATGCTTCCGTTTTACTGTCTGAACTAAGATCTAACGCGTCGGTCTTTGGCTCTTCTTTCCAGCGAGTTGCTTCATGTTTCGTCCAAGGTCTAGCTGATAGGCTTGCAATGGTTCAACCAGCTGGGGCTGTGGGGTTAACGGCACCCATGATGAACATTATGGATGCAGCCTCAGAAAAAATGGAAGAAGCATTTGGATTGGTTTATGAAATTTGCCCACATATCCGATTTGGTCACTTCGTAGCTACTTCCACAATATTGGAAGCCTTCGAGGGTCAGGGTTTTCTTCATGTATTGGACCTGGGGATGACCCTGGCCCTCCCAAATGGTCACCAATGGAGGGGATTGATCCAGAGCCTTGCTGATCGTGCAGGCCAACCCATTCATCGCCTTCGAATTACCAGCGTTGGCCTTTGTGTTCAAAAACTCCAATCCATTGGTGAAGAACTCGAAGTTTATGCAAATAACCTGGGAATCAATTTGGAGTTCTCAGTTGTTCAAAAGAACTTAGAAAATTTGAATACTGATGACATTAAGGTCTACGAGGGAGAGGTTCTTGTGGTGAATAGCATTCTTCAGCTGCATTGTGTGGTTAAAGAAAGTCTTGGGGCTTTTAACACAGTGCTCCAGATGATTCATAAGCTTTCACCAAAGGTCTTGGTTATGGTTGAGCAGGACTCGAACCACAATGGACCATTTTTTCTTGGGAGGTTCATGGAAGCACTTCACTATTACTCTGCTATTTTTGACTCGCTGGATGCCATGTTGCCTAAGTATGACACTAGGCGAGCCAAAATGGAGCAGTTCTACTTTGCTGAGGAGATAAACAACATTGTGAGCCGTGAGGGATCAGCAAGGGTGGAGAGGCACGAGAGAGTGGACCAATGGCGCAGGAGGATGAGGAGGGCTGGGTTTCAGGCTGCACCTATTAAGATGGTGGCTCAGGCCAAGCAGTGGCTCCACAAGAATAAGGTGTGTGATGGCTACACCGTGGTGGAAGAGAAGGGTTGCTTGGTGTTTGGGTGGAAATCAAAGCCAATTGTGGCAGCTTCTTGCTGGAAATGCTGA 1512 0.455 MIPPPLYSAYKGELGDDGQNPVFGLVFHRSAKGCFAHPHIPILESRISSWTLLLSEETNEENNNKSIKRNISIIPDSGSSRSVNSLPRLHFRDHIWTYTQRYLAAEAVEDIINSELSGAEEEDGCADGMKLVQFLIVCAEAVACRDKSHASVLLSELRSNASVFGSSFQRVASCFVQGLADRLAMVQPAGAVGLTAPMMNIMDAASEKMEEAFGLVYEICPHIRFGHFVATSTILEAFEGQGFLHVLDLGMTLALPNGHQWRGLIQSLADRAGQPIHRLRITSVGLCVQKLQSIGEELEVYANNLGINLEFSVVQKNLENLNTDDIKVYEGEVLVVNSILQLHCVVKESLGAFNTVLQMIHKLSPKVLVMVEQDSNHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKMEQFYFAEEINNIVSREGSARVERHERVDQWRRRMRRAGFQAAPIKMVAQAKQWLHKNKVCDGYTVVEEKGCLVFGWKSKPIVAASCWKC 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0585 503 Pfam GRAS domain family 131 502 IPR005202 -
Glsi02g0585 503 ProSiteProfiles GRAS family profile. 122 502 IPR005202 -
Glsi02g0585 503 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 104 497 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0585 Glsi-ChrGlsi02 3779708 3781219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0585 112 502 GRAS Transcription Factor Family AT1G66350 36.181 7.39e-74 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi02g0585 GRAS 1.2e-108 CL0063