Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0575 ATGGCGGCAGGGAGAGACAATGTTTTGAGGAGAAGAGAATCTTACAAATATAGTTCCAATAAGGAATTTGATAATTATACGAATGGTTCTTCTGGCGTGGGAGTGCATCGATCTTGCAACCACCACGTCACCTATAAGAATGGGCATAGATCGTCATCAGTTGTTCAGGATTCAGATTCTGGACGGATTGGACTTTGTGATAAAAGAGGAGAGAAAGAACAGGTCGAGTTTTACAGAGAAAATGGGGGATATTCACCTGCCTCTGGGTTTCAGGAGGGTGATGTTGAAATCCAGGACAATGAAAAAGATTTGGCACCACCAGGGAAGAGAAGGAAAATTTCTCCAATTGTATGGGACCTGGCAGAAAAGGAAGTAAGAATATCTTCAAAAAATAGGATCACACAGGTCACTGCTCTGTCTCCCACCTGTCCATCTCAATCAACTGCCCAGGGAGCCAATGTTGTTTTCCATGGCGGCATCATTAGTCCTGAGTCTTCACCTGATTCCTCTTATGCATTGCCTCAAGAACATTCAGTGAATGAGGGCCAAGATGTTGATCGGTTTGAAGAAAACCATGTGCAAGGTTGGAATATCACAATGTCAAGATGGGCATCCGATGGTTATTCCCAGAGGGATGCATCTGATGATGAATACATGCATGTCAAGGAGAGCTCAAGTTCAGAAAGTGGCGAATTCAGAGGAGAAAGTTCTGAAGGCAGAAAAACTAAATCATCAGGAAGCAGTGGAGGTAGTCATTATCTGGGCCCTTCAAGCGAAGAAGATATTGAATCTGAAGAGGAGTCACTTGTTGTGAACTGTATGAATGCTGATGAGGAACATAGTGAAATTGCCTATGTTAGTCATCCTTCATCAGATTCTGAAGATAGTGCTAGTTTAATCCAAGCGCAGAGAAACATAAACATGCTCCAGAGTTCCAGAAGCGTGTTTGAATTTGAAATGATTAAGAAAATAAATGAAGGAACTTATGGTGTTGTCTATAAAGCTAGGGATAAGAAGACTGGAGAAATAGTTGCATTAAAGAAGGTGAAGATGAACATAGATAGGGATGGCTTTCCATTGTCGTCTGTGAGGGAAATAAACATTCTCTTATCTTTTAATCATCCTTCCATTGTTGATGTTAAAGAAGTGGTTGTGGATGATTTTGATGGTGTGTTTATGGTAATGGAGTACATGGAATATGACCTTAAGGGGTTGATGGAGGTGATTAAACAGCCCTTTAGTATAGGTGAAATAAAATCCTTGATGAGGAAACTTCTTGAGGGTGTCAAGTATCTCCATCACAATTGGGTTCTCCATAGGGACTTGAAGACATCAAATCTTCTATTAAACAAAGGTGGTGAGCTGAAAATATGTGACTTTGGGTTATCTCGTCAGTATGGAAGCCCACAGAAGCCATATACTCCTGTTGTGGTTACTCTATGGTACAGAGCTCCTGAACTGCTGTTAGGTGCCAAAGAATACTCAACAGCGATTGACTTGTGGTCAGTGGGTTGCATAATGGCTGAATTAGTTGCCAAGCAGCCTCTGTTCAGGGGAAAATCTGAAGTTGAGCAGCTCAATAAGATTTTTCAAACCCTGGGCACACCAGATGAGAAAATTTGGCCAGGATTATCGAAATTACCGGGCTCCAAGGCTAATTTTGTTAAGCAACCGTATAATCTTTTGCGGAAGAAGTTTCCAGTGGCATCTTTTACTGGATCACCTGTTCTGTCTGAATTGGGATTTGACTTGTTGAACAAGCTTCTAACTTTTGACCCTGAAAAGAGGATAACTGCAGAAGCTGCTCTTCTTCATGATTGGTTCATTGAAGCCCCTCTTCCCAAATCTGACTTCAATCTTACTTTTCCTTCTCAGCGTGGCTAG 1884 0.4161 MAAGRDNVLRRRESYKYSSNKEFDNYTNGSSGVGVHRSCNHHVTYKNGHRSSSVVQDSDSGRIGLCDKRGEKEQVEFYRENGGYSPASGFQEGDVEIQDNEKDLAPPGKRRKISPIVWDLAEKEVRISSKNRITQVTALSPTCPSQSTAQGANVVFHGGIISPESSPDSSYALPQEHSVNEGQDVDRFEENHVQGWNITMSRWASDGYSQRDASDDEYMHVKESSSSESGEFRGESSEGRKTKSSGSSGGSHYLGPSSEEDIESEEESLVVNCMNADEEHSEIAYVSHPSSDSEDSASLIQAQRNINMLQSSRSVFEFEMIKKINEGTYGVVYKARDKKTGEIVALKKVKMNIDRDGFPLSSVREINILLSFNHPSIVDVKEVVVDDFDGVFMVMEYMEYDLKGLMEVIKQPFSIGEIKSLMRKLLEGVKYLHHNWVLHRDLKTSNLLLNKGGELKICDFGLSRQYGSPQKPYTPVVVTLWYRAPELLLGAKEYSTAIDLWSVGCIMAELVAKQPLFRGKSEVEQLNKIFQTLGTPDEKIWPGLSKLPGSKANFVKQPYNLLRKKFPVASFTGSPVLSELGFDLLNKLLTFDPEKRITAEAALLHDWFIEAPLPKSDFNLTFPSQRG 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0575 627 MobiDBLite consensus disorder prediction 208 268 - -
Glsi02g0575 627 MobiDBLite consensus disorder prediction 161 183 - -
Glsi02g0575 627 FunFam cyclin-dependent kinase G-2 isoform X1 303 399 - -
Glsi02g0575 627 CDD STKc_CDC2L1 313 608 IPR045267 GO:0004674|GO:0005524|GO:0006468
Glsi02g0575 627 SUPERFAMILY Protein kinase-like (PK-like) 316 613 IPR011009 -
Glsi02g0575 627 Gene3D Transferase(Phosphotransferase) domain 1 400 619 - -
Glsi02g0575 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Glsi02g0575 627 Gene3D Phosphorylase Kinase; domain 1 304 399 - -
Glsi02g0575 627 PANTHER CELL DIVISION PROTEIN KINASE 317 614 - -
Glsi02g0575 627 Pfam Protein kinase domain 318 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0575 627 MobiDBLite consensus disorder prediction 163 177 - -
Glsi02g0575 627 ProSiteProfiles Protein kinase domain profile. 318 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0575 627 SMART serkin_6 318 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0575 627 MobiDBLite consensus disorder prediction 209 240 - -
Glsi02g0575 627 FunFam Cyclin-dependent kinase G-2 400 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0575 Glsi-ChrGlsi02 3705382 3707739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0575 312 614 Core Cell Cycle Gene Families AT5G10270 47.022 1.41e-87 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Glsi02g0575 Pkinase 3.4e-71 CL0016