Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0571 ATGGCTAACCATCATATGACCCTTGGTAGTTGCAGGTTTGGCGTGGTGATATTTGGAATTTCAACCACTCAAAATAGGACACAAGAGCACACACAAGCTCCTGCCATATGGAAGAGTCCACGGGGAACACTGGGTTCTATACAAAATGTCACATCTATATGTAAGATGTGTGTATGGGCAAATAGGGGAGACAGCCTGTCACGATATGATTCTTATACGTTATTAATTTGGTTTCTTCATAACTGTTCCATTCCGACCTTACCTTGTGGTCAGAAGAGGGAGGAGTCTCTTCCCTCTTCACTGGGCTGGAGGGAGAGCCAGACTCCATTATTGCTGCAGAAAGAGCATAGCACGAACGACCACCATGTGGAAGCAGTAAATGCATCAACTTCAGGTACCCCACTCTCTTGGTCCTTGAAGCCGTTAAGAGAACTTCCCATGGGTTGCCGTGACTTGGTTTTGTTATTCTGTGTTACTTGGTGGGTCTTTTCTGTGGGTGGTGCCCAATTGCAGTCCTCTCAGACCCAGGTGCTTCTTCAGTTAAAAGAGCACTTGGAGTACCCAAAACAGCTGGAAATTTGGATAGATCGTTGGACAAGTTTTTGCTCTATATCTTCACCTACCCAAGTAAACGTCACATGCCAGGACAACTTCGTTACTGAGCTAAGCATATTGGGGGATAAGCCAGCCAAGGTTAGAGATTTTAATGGGTTTGCTATTCCAAATCAAACACTATCAGCAAACTTCTCTATGGATTCTTTCGTGGCTACTCTGGCGAGGCTAACTAGCTTGAAAGTTCTTCGTCTCGTCTCTTTGGGCATTTGGGGTCCACTTCCAGATAAAATCCACCGACTATTTGCACTTGAACATTTGGACTTGAGTTCAAACTTTCTTTATGGATCAATCCCTCCAAAGATTTCTACAATGATGAATCTTCAAATTCTTCGACTGGATAATAACTTCTTTAATGATACCATTCCCAACTGGTTCAATTCATTAACTAATTTGACAGTTCTTGTTTTGAGGAACAACAGGTTGAAGGGTCCATTTCCATTTTCAATCCTTAGCATCACTACTCTGGCTGACATTGACATGTCAAGCAATGAAATATCGGGGAGATTAGCGGATTTTAGTAGATTGAATAACTTAGAACAGCTAGATTTGAGAGAAAACAGATTAAACTCTGTACTACCCGAAATGCCCAAAGGGTTGGTGAGGCTTTTTCTTAGCAAAAACTCCTTCTCAGGTGAAATTCCCAAGCATTATGGTCAGCTAAATCAGCTTCAACAGCTTGATATTTCATTCAATACACTCAAAGGAAAGCCTCCTTCTGAGATTTTCTCCTTGCCCCACATCACTTACTTGAATTTGGCATCAAACACGTTGAGTGGGCCACTTCAAAATCATCTAAACTGTAGCTCCGAACTTAAATTTGTTGATATATCACATAACAGATTAGTAGGTGGCTTGCCTTCTTGTCTGGGAACAGAGTCAGAAAACAGAGTTGTGAAGAGTGAAGGAAACTGCTTATCCTCTAAGCTACAGCATCAGCATGCAGTATCATACTGCACAGAGGTTCATACGAAGAGGAAGAACGCACCCAGAGTTGGAATTTTAGTTGGTGTAATTGTGGGAGTTATTGTTATAGTTGTGCTTTTGGCTTTGGGATTGCTTATAGTATGCAGAAGGTATTGCCCTCGGGGGATATCAGAGCAGCATCTATTGCATAAAACAGTTCAAGATAGCTCTACAGCAGCAGCAGGAGGGTTCTCCTCTGAGCTTCTGTCTAATGCAAGGTTTGTTTCCCAAGCGTCGAAGCTCGACAGAGAAGAGCTCCCCATGTGTCGGCCCTATTCCTTCGAAGAGTTAAAGGAAGCTACAGATAACTTCGACAAATCTACTTTTATGGGTAAAAATTTATATGGGAAGCTTTATAGAGGGAAGCTGGAGAACGGGAAACAAGTTGCAGTAAGGCGGCTGCCTTTGTCAAAAAAGTATTCATTTAGGAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTCCGTCACCCTCATTTGGTAACCCTTTTAGGGCACTGCATTGATGGTGTTGTAGCAGACGATAGTGGCCCAAACGTCTTTCTCGTATATGAATATGTGCCCAATGGAAATTTTCAGACTTATCTCTCTGGAAATAGTCCTGGCAAGGTTTTCAATTGGTCAGAGCGATTGGCAGTTCTAATTAGTATTGCAAAGGCTGTTCACTTCCTACACACTGGAATGATACCTGGCTTCTTCAAAAACCGACTTAAGACAAACAATATATTGCTTAATGAGCACTGGACGGCGAAGTTGGGTGACTATGGATTGTCCATTATCTCGGAAGAAGCTGACACATGTGGGGGAAAAGGAGAAAGCCCTAGATCATGGGAAATGAAAATATTAGAGGATGATGTTTATAGCTTTGGATTCATACTACTCGAGGCACTTGTTGGACCCTCTGTATCTGCTAAAAGAGAAGCAATTCTGCTGAATATAATGGCGTCTTTCAACAGTCAAGATGGCTGGAAGCAGACGGTGGACCCAATAGTGCAAGCTACTTGCTCTCGAGAATCTTTATTAATTGTGATTTCTATAACAAACAAATGCATTTCTCCTGAATCATTGAGCCGACCATCCATTGAGGATGTCCTTTGGAACTTGCAGTACGCTTCTCAAGTCCAGGCAACAGTTGACGGAGATGAAAGATTTGATACTGCATCACATCATCGGCGAGAGAATTTTGAACTTTGTTTCTAG 2778 0.4233 MANHHMTLGSCRFGVVIFGISTTQNRTQEHTQAPAIWKSPRGTLGSIQNVTSICKMCVWANRGDSLSRYDSYTLLIWFLHNCSIPTLPCGQKREESLPSSLGWRESQTPLLLQKEHSTNDHHVEAVNASTSGTPLSWSLKPLRELPMGCRDLVLLFCVTWWVFSVGGAQLQSSQTQVLLQLKEHLEYPKQLEIWIDRWTSFCSISSPTQVNVTCQDNFVTELSILGDKPAKVRDFNGFAIPNQTLSANFSMDSFVATLARLTSLKVLRLVSLGIWGPLPDKIHRLFALEHLDLSSNFLYGSIPPKISTMMNLQILRLDNNFFNDTIPNWFNSLTNLTVLVLRNNRLKGPFPFSILSITTLADIDMSSNEISGRLADFSRLNNLEQLDLRENRLNSVLPEMPKGLVRLFLSKNSFSGEIPKHYGQLNQLQQLDISFNTLKGKPPSEIFSLPHITYLNLASNTLSGPLQNHLNCSSELKFVDISHNRLVGGLPSCLGTESENRVVKSEGNCLSSKLQHQHAVSYCTEVHTKRKNAPRVGILVGVIVGVIVIVVLLALGLLIVCRRYCPRGISEQHLLHKTVQDSSTAAAGGFSSELLSNARFVSQASKLDREELPMCRPYSFEELKEATDNFDKSTFMGKNLYGKLYRGKLENGKQVAVRRLPLSKKYSFRNFKLRLDLLAKLRHPHLVTLLGHCIDGVVADDSGPNVFLVYEYVPNGNFQTYLSGNSPGKVFNWSERLAVLISIAKAVHFLHTGMIPGFFKNRLKTNNILLNEHWTAKLGDYGLSIISEEADTCGGKGESPRSWEMKILEDDVYSFGFILLEALVGPSVSAKREAILLNIMASFNSQDGWKQTVDPIVQATCSRESLLIVISITNKCISPESLSRPSIEDVLWNLQYASQVQATVDGDERFDTASHHRRENFELCF 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0571 925 Pfam Leucine rich repeat 403 462 IPR001611 GO:0005515
Glsi02g0571 925 Pfam Leucine rich repeat 311 370 IPR001611 GO:0005515
Glsi02g0571 925 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 171 402 - -
Glsi02g0571 925 Gene3D Transferase(Phosphotransferase) domain 1 713 917 - -
Glsi02g0571 925 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 246 894 - -
Glsi02g0571 925 Gene3D Ribonuclease Inhibitor 171 403 IPR032675 -
Glsi02g0571 925 SUPERFAMILY Protein kinase-like (PK-like) 612 895 IPR011009 -
Glsi02g0571 925 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 713 913 - -
Glsi02g0571 925 Gene3D Phosphorylase Kinase; domain 1 593 712 - -
Glsi02g0571 925 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 404 528 - -
Glsi02g0571 925 SMART LRR_typ_2 285 309 IPR003591 -
Glsi02g0571 925 SMART LRR_typ_2 333 362 IPR003591 -
Glsi02g0571 925 SMART LRR_typ_2 380 403 IPR003591 -
Glsi02g0571 925 SMART LRR_typ_2 425 449 IPR003591 -
Glsi02g0571 925 Pfam Leucine Rich Repeat 288 303 IPR001611 GO:0005515
Glsi02g0571 925 Gene3D Ribonuclease Inhibitor 404 535 IPR032675 -
Glsi02g0571 925 ProSiteProfiles Protein kinase domain profile. 630 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g0571 925 SUPERFAMILY L domain-like 74 512 - -
Glsi02g0571 925 Pfam Protein tyrosine and serine/threonine kinase 636 890 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0571 Glsi-ChrGlsi02 3684950 3691272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0571 152 842 Miscellaneous Gene Families AT5G14210 52.068 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Glsi02g0571 PK_Tyr_Ser-Thr 2e-19 CL0016