Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0558 ATGGCAGTTGCATTCCATGGCCTTAACTCTGGATCTGGGTTGAAGAAGCTTGACGATTACCTTCTCACCCGCAGTTACATCACTGGGTACCAAGCATCGAAGGACGATATTACGGTATACGCGGCCTTGTCAAAAGCCCCATCGGCTGAATATGTGAATGTGTCCCGGTGGTACAATCACATTGATGCTTTATTGAGAATATCGGGTGTTTCTGGTGAGGGATCTGGTGTCATCGTGGAGGGATCTGTTCCAGAGGAGAGCGTAGCCACTCCTCCAGTTGCTGACGCAAAGGCTACATCAGCTGAAGACGACGATGATGATGTGGATTTGTTTGGTGAAGAGACAGAGGAGGAGAAGAAGGCTGCTGAAGAACGACAAGCCGCTGTGAAGGCATCTGCAAAAAAGAAAGAGTCTGGGAAGTCATCTGTTCTGATGGATGTGAAGCCATGGGATGATGAAACAGACATGAAAAAGCTCGAAGAAGCAGTGAGAAGTGTTCAGATGGATGGGCTGCTTTGGGGTGCTTCCAAACTTGTTCCTGTTGGTTACGGTATCAAGAAACTGCAAATTCTGCTTACTATTGTGGATGACCTGGTCTCTGTTGACGACCTCATTGAGGAGCGTCTCCTGACTGAGCCAATTAACGAATATGTCCAGAGTTGTGATATTGTGGCCTTCAATAAAATATTTAAAGAAATTTTTAGTGCCACTGCCATGTTTTGA 723 0.4633 MAVAFHGLNSGSGLKKLDDYLLTRSYITGYQASKDDITVYAALSKAPSAEYVNVSRWYNHIDALLRISGVSGEGSGVIVEGSVPEESVATPPVADAKATSAEDDDDDVDLFGEETEEEKKAAEERQAAVKASAKKKESGKSSVLMDVKPWDDETDMKKLEEAVRSVQMDGLLWGASKLVPVGYGIKKLQILLTIVDDLVSVDDLIEERLLTEPINEYVQSCDIVAFNKIFKEIFSATAMF 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0558 240 MobiDBLite consensus disorder prediction 84 107 - -
Glsi02g0558 240 CDD EF1B 138 229 IPR014038 GO:0003746|GO:0006414
Glsi02g0558 240 SMART EF1_GNE_2 140 229 IPR014038 GO:0003746|GO:0006414
Glsi02g0558 240 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 218 229 IPR001326 GO:0003746|GO:0005853|GO:0006414
Glsi02g0558 240 SUPERFAMILY eEF-1beta-like 137 229 IPR036219 -
Glsi02g0558 240 Gene3D - 133 229 IPR014717 -
Glsi02g0558 240 SUPERFAMILY GST C-terminal domain-like 11 67 IPR036282 -
Glsi02g0558 240 Gene3D - 7 74 - -
Glsi02g0558 240 FunFam Elongation factor 1-delta 1 3 78 - -
Glsi02g0558 240 Pfam EF-1 guanine nucleotide exchange domain 142 229 IPR014038 GO:0003746|GO:0006414
Glsi02g0558 240 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 104 112 IPR001326 GO:0003746|GO:0005853|GO:0006414
Glsi02g0558 240 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 10 229 - -
Glsi02g0558 240 FunFam Elongation factor 1-beta 1 like 133 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0558 Glsi-ChrGlsi02 3599382 3600906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0558 4 229 Eukaryotic Initiation Factors Gene Family AT2G18110 82.096 1.63e-120 341