LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi02g0554	ATGACGACCACGACCTCGAGTCTAGGTAGTGATGATGGTGGCGGCGAGGACCGGGTACTTGCGACGGCTCAGCAGATCGTCAAAAGCCTCAACACCCCCGATGAGGTTCGCCAAGACATGCTTTTGATCCTCTCTAGCTTCGATAATCGCCTTTCCAATATTACCCATCTCCTCAATGGCGAGGATTCCAAGTCTTCTGACGCAGAACCAGAAGATTTTGACCGCTTCGAAGCTGCTGAGAAAGTCATCCTCCGCTGGGACGCCTCCGTTTCTGGAGAACCTTCCCGGCAGTCCACCTCGTTTCTGGATTCGCCGGATGATGCGGCGGAGTATTTTTCTGCCGTCGACGAGATCAATCAGTGGATTGAGCAATTTTCGATCGCACCGTCCGATAAAAGTAGGCAAATCTTGTTGGACCGGGCGGAGAACGCAATCCAGCTTGCCATGTCAAGGCTGGAGGACGAGTTGCGCCACGTCTTGATTCGGAACACAGTCCCACTTGACGCTGATAATCTCTATGGCTCGATCAGGAGGGTTTCTCTCTCGTTTGCCTCTAATTATGGGGATATTGGCGAAAATTTAGAGAGCTTTGGCGAGGTCAATGATCGCGGCTCTCAGCGGTTTCACGAGCGAGGTGCGAGCTTGGGTGATGATGTCTTTGTTGATTTGATACACCCCGATGCTATGGGTGAGCTGAAAGAGATTGCTGATCGGATGATTAGGCCTGGGTACGAAAAGGAGTGCCTTCAGGTTTATAGCAATGTCCGTCGTGACGCCTTGGATGAGTGCTTAGTTATCTTAGGTGTTGAGAAATTGAGTATTGAAGATGTTCAGAAGGTTGAGTGGAAAACCTTGGATGAGAAAATGAAGAAATGGATACAAGCTGTTAAAATTGTTGTTAGGGTCCTTCTGACTGGCGAAAAGAGGCTCTGTGATAGTATATTTGGTGAATTGGATGAGATCAAGGAGATCTGCTTCAATGAGACTGCTAAAGGGTGTATTATGCAGTTATTGAATTTTGCTGAGGCCATTGCAATTTGTAAAAGATCGGCAGAGAAATTGTTTAGGATATTGGATATGTACGAGGCTCTGAGGGATGAGTTGCCTGACCTGGAGACTATGGTTTCAGATGAGTTCGTGATCAGTGAGGCTAAGGTAGTGCTAACTGGACTTCGTGAGGCTGCTAGAGGGACATTTGCTGAGTTTGAGAATGCTGTTCGGAATGAAACTTCCAAAAAGGCAGTCATAACTGGGGACCTTCACCCATTGCCTCGTTATGTAATGAATTACTTGAAGTTGCTCGTGGATTATAGTGACCCTATGGATTCAGTTATAGAATTTAGCGAAGAGGATCTAGAACGTTTTCAAAACAAATATGGTGGTGATAGTTCTCAGTTAGAGAACATGTCCCCCCTAGGACGACAAATGCTGTTATTAATATCAGAGCTTGAGTATAATCTTAACGAAAAATCAAGACTTTATGAAGACAATGCAATGCAGTATATATTTTTGATGAACAATATTCACTACATAGTACACAAAGTGAAAGACTCGGATCTTCATAAGGTCTTGGGAGATGATTGGATTCGTAAGCGCGGTGGTCAGATACGCCAATATGCAACAGGCTATCTCAGAGCCTCTTGGAGCAAGGCCTTGTCTTGTTTGAAGGATGAAGGAATTGGAGGGAGCTCTGGCAATGCCTCAAAGACAGTTTTGAAGGAGAGATTTAAGAATTTCAATGCATGCTTTGAGGAAATATATAGGATTCAGACAGCTTGGAAGGTCCCAGATGCTCAGCTTCGGGAAGAGCTACGAATCTCTATATCAGAGAAAGTGATTCCTGCATACCGCTCTTTTGTGGGAAGGTTTAGGAGTCAGCTAGAGGGAAGGCATGTTGGGAAGTACATAAAGTATACACCAGAGGATTTAGAGAACTATTTATTGGATTTATTTGAAGGATCACCTGGTGTATTGCACCACATAAGGAGGAAAGGTACATAA	2001	0.4513	MTTTTSSLGSDDGGGEDRVLATAQQIVKSLNTPDEVRQDMLLILSSFDNRLSNITHLLNGEDSKSSDAEPEDFDRFEAAEKVILRWDASVSGEPSRQSTSFLDSPDDAAEYFSAVDEINQWIEQFSIAPSDKSRQILLDRAENAIQLAMSRLEDELRHVLIRNTVPLDADNLYGSIRRVSLSFASNYGDIGENLESFGEVNDRGSQRFHERGASLGDDVFVDLIHPDAMGELKEIADRMIRPGYEKECLQVYSNVRRDALDECLVILGVEKLSIEDVQKVEWKTLDEKMKKWIQAVKIVVRVLLTGEKRLCDSIFGELDEIKEICFNETAKGCIMQLLNFAEAIAICKRSAEKLFRILDMYEALRDELPDLETMVSDEFVISEAKVVLTGLREAARGTFAEFENAVRNETSKKAVITGDLHPLPRYVMNYLKLLVDYSDPMDSVIEFSEEDLERFQNKYGGDSSQLENMSPLGRQMLLLISELEYNLNEKSRLYEDNAMQYIFLMNNIHYIVHKVKDSDLHKVLGDDWIRKRGGQIRQYATGYLRASWSKALSCLKDEGIGGSSGNASKTVLKERFKNFNACFEEIYRIQTAWKVPDAQLREELRISISEKVIPAYRSFVGRFRSQLEGRHVGKYIKYTPEDLENYLLDLFEGSPGVLHHIRRKGT	666

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi02g0554	666	FunFam	Exocyst subunit Exo70 family protein	95	659	-	-
	Glsi02g0554	666	Coils	Coil	138	158	-	-
	Glsi02g0554	666	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	71	653	IPR004140	GO:0000145\|GO:0006887
	Glsi02g0554	666	Gene3D	Exocyst complex component Exo70	95	657	-	-
	Glsi02g0554	666	Pfam	Exo70 exocyst complex subunit	290	648	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Glsi02g0554	666	SUPERFAMILY	Cullin repeat-like	73	652	IPR016159	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi02g0554	Glsi-ChrGlsi02	3580722	3582722	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi02g0554	17	664	EXO70 exocyst subunit family	AT5G50380	61.778	0.0	800