Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0538 ATGGTTGCAGTGCATGAGAAACTGAAAGCCTTCGTGGGCCACAGATGGCTGGTGTTTGTTTGTGCAATGTGGGTGCAGTCATTTGCGGGGATGGCTTACATGTTTGGGAGCATATCGCCGGTGATTAAGAGCTCCATGGGCTACAACCAGAAGCAGGTGGCGCTGCTGGGTGTGGCCAAGGATTTGGGTGATAATATCGGCCTTCTGGCCGGCAAAATCAGCGAGGGATCCCCCACTTGGCGAGTTCTACTTATTGGTGTCGTCCAGAACTTTGTTGGCTACGGCCTCGTTTGGCTCGTAGTCAACCATAGCTTTCCTTCTTTCCCTCTATGGGCGTTATGCATTTGTATATTTGTGGGAACAAATGGAGCTACATATTACAGCACAGCTACCATCGTTACCGGCGTGCAAAACTTTCCTAATTACAGAGGACCCGTCTTGGGGATATTGAAGGGCTTTGTTGGGTTAAGCGGTGCAATTTTGACTCAAATTGTTGCAATGATCAACGCCCCCGACCAGGCTTCTCTGATATTCATTATAGCAGTTGGTCCTGCCATGGTTGCTAGCTCTCTTATGTTCATTATTAGACCCGTCCAAAGTTACAAAGATAGAGCTTCTGATAGTTCAAGCTTCTTGTTTATCTACAGTATTTGCCTCCTTTTGGCAGCTTATCTTATGGGAGTTTTGCTGCTGGAAAATGTGATGGATTTGGACGTGAACACCATCAGATTATTTGCAGTTATTTTAATCATTCTCATTTTGCTTCCAATTATGATTCCTATTCTATTGGTTTTCTTCTTTGAACCTAAAATCCCAGACTTGGAAGCCTTGCTTCTTGACCCGCCAATGCCAGCACCAACTAAATCCAAGCAGGTGGTAGATGAGAGTGAGACTGTCGCTGGTGACGTAGAAAACGAGAAACCCCCAAAACTAGAGGCGTTTCCCTTATCAGAAGGGCCAACAGATATTGTTCATTTTGAAGAAGTGTTGCAAGTAGTCACAGCAGCTGTAAAGAATATCAAGCCGAAAAATGGTCCACGCAGAGGAGAGGATTTCACCTTAATGCAAGCACTGGTTAAGGCAGATTTTTGGCTAATCTTCTTCTCTCTGGTCCTGGGTGCTGGCTCGGGTTTGACAATTATAAACAACTTGGGTCAGATATGCCAATCATTGGGAGATAACAATGCAAAAGTTTATGTATCCATAATCAGCATATCCAACTTCCTTGGTCGCATTGGTGGTGGCTACTTCTCAGAGGTCATCATAAGAAAGTTTGCGTACCCAAGACTAGTTGCGTTGGTGGTGGTTCAGGTCATAATGTCAATGGGATTCTCCTATTATGCAATGGGTTGGGGAGGACAACTTTATGTGGTGACCATATTGACAGGGCTTGGATATGGTGCCCACTGGGCAATTGGGCCAGCTGCAACTTCAGAACTATTCGGGTTGAAGAATTTTGGGACTATATACAATTTTCTCATCTTAGCAAACCCAGCTGGGTCTCTGTTTTTATCTGGTTTCGTAGCAAGCACAATATACGACTATTATGCAGGGCAGCAAGCAAAGCGCCTTATGCTTGATAATGACATCAATGAAAGTGAGTTGCTTGTTTGTGAGGGAAACATATGCTATTCCCTGACTTGTGGAATCTTAGCAGGAGTTTGCCTATTTGCATGTGTCTTGAGCTTGATCCTTCTTCCCCGGACTAAGAGGGTCTATGCTCAACTTTATGGGAAGTCTGCAACTTGA 1749 0.4477 MVAVHEKLKAFVGHRWLVFVCAMWVQSFAGMAYMFGSISPVIKSSMGYNQKQVALLGVAKDLGDNIGLLAGKISEGSPTWRVLLIGVVQNFVGYGLVWLVVNHSFPSFPLWALCICIFVGTNGATYYSTATIVTGVQNFPNYRGPVLGILKGFVGLSGAILTQIVAMINAPDQASLIFIIAVGPAMVASSLMFIIRPVQSYKDRASDSSSFLFIYSICLLLAAYLMGVLLLENVMDLDVNTIRLFAVILIILILLPIMIPILLVFFFEPKIPDLEALLLDPPMPAPTKSKQVVDESETVAGDVENEKPPKLEAFPLSEGPTDIVHFEEVLQVVTAAVKNIKPKNGPRRGEDFTLMQALVKADFWLIFFSLVLGAGSGLTIINNLGQICQSLGDNNAKVYVSIISISNFLGRIGGGYFSEVIIRKFAYPRLVALVVVQVIMSMGFSYYAMGWGGQLYVVTILTGLGYGAHWAIGPAATSELFGLKNFGTIYNFLILANPAGSLFLSGFVASTIYDYYAGQQAKRLMLDNDINESELLVCEGNICYSLTCGILAGVCLFACVLSLILLPRTKRVYAQLYGKSAT 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0538 582 Gene3D MFS general substrate transporter like domains 355 574 IPR036259 -
Glsi02g0538 582 Gene3D MFS general substrate transporter like domains 13 203 IPR036259 -
Glsi02g0538 582 SUPERFAMILY MFS general substrate transporter 203 572 IPR036259 -
Glsi02g0538 582 CDD MFS_Mch1p_like 14 559 - -
Glsi02g0538 582 Pfam Nodulin-like 15 261 IPR010658 -
Glsi02g0538 582 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 574 - -
Glsi02g0538 582 SUPERFAMILY MFS general substrate transporter 8 199 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0538 Glsi-ChrGlsi02 3484880 3488214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0538 3 582 Nodulin-like Gene Family AT5G14120 53.952 0.0 614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0538 02 3484880 3488214 Glsi02g0538 02 3484880 3488214 ECH