Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0521 ATGCCTGCACTGCAGATTCCCAGGCAAGGAGAACCAACACTGGTTCCCCCTACAGAGGAAACAGAAAAGATTCTATACTTCCTGTCAAACATTGACCAGACTTTAGCAGCTGTCACAATTCGCACTGTTTATTGTTTCAAATCGGCTTGCAGAGGAAATGGTGATGCTCTCCAAGTTATCAAACATGCCTTGTCAAAGATTCTTGTTCCTTGTTACCCTATGGCAGGCAAGCTTACTATTATCTCAGAAGGAAAGTTCATAGTGAATTGCACTGGGGAGGGTGCACTCTTTGTTGACGCTGAAGCAAACTGTAATATTGAGAACATAGGCGAACTCACAAAGCCTGATCCTGCACTTCTCGGGAAACTGATCTATGACATCCCTGGTGGAGACAGCCTACTTGAGATGCCTCTTTTGGCGGCTCAGGTGACCAAGTTCAAATGCGGAGCATTCTCTCTGGGGATAAGCGCGAACCATGGTATGGAAGATGGACTCTGTGCTATGCAATCTAGTGGTTTAACCTATTCTTTATGCAGACTTAGAATTATATATTGTCTATGGTTCAAGTGA 570 0.4439 MPALQIPRQGEPTLVPPTEETEKILYFLSNIDQTLAAVTIRTVYCFKSACRGNGDALQVIKHALSKILVPCYPMAGKLTIISEGKFIVNCTGEGALFVDAEANCNIENIGELTKPDPALLGKLIYDIPGGDSLLEMPLLAAQVTKFKCGAFSLGISANHGMEDGLCAMQSSGLTYSLCRLRIIYCLWFK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0521 189 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 169 - -
Glsi02g0521 189 Gene3D - 9 179 IPR023213 -
Glsi02g0521 189 Pfam Transferase family 13 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0521 Glsi-ChrGlsi02 3383071 3383879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0521 11 169 Monolignol Biosynthesis Gene Families AT5G48930 36.250 2.04e-25 99.8